RNA–Protein interactions for RNA: ENST00000396334.7

MYD88-201, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MYD88, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-201ENST00000396334 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
MYD88-201ENST00000396334 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
MYD88-201ENST00000396334 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
MYD88-201ENST00000396334 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
MYD88-201ENST00000396334 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
MYD88-201ENST00000396334 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
MYD88-201ENST00000396334 HRCP23327 699 aa23.86■■□□□ 1.41
MYD88-201ENST00000396334 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
MYD88-201ENST00000396334 DCAF1Q9Y4B6 1507 aa23.5■■□□□ 1.35
MYD88-201ENST00000396334 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
MYD88-201ENST00000396334 PCGF6Q9BYE7 350 aa23.36■■□□□ 1.33
MYD88-201ENST00000396334 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
MYD88-201ENST00000396334 PELP1Q8IZL8 1130 aaKnown RBP23.05■■□□□ 1.28
MYD88-201ENST00000396334 LOC105371045A0A1W2PR82 267 aa22.99■■□□□ 1.27
MYD88-201ENST00000396334 ABCC9O60706 1549 aa22.99■■□□□ 1.27
MYD88-201ENST00000396334 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
MYD88-201ENST00000396334 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
MYD88-201ENST00000396334 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
MYD88-201ENST00000396334 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
MYD88-201ENST00000396334 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.21
MYD88-201ENST00000396334 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
MYD88-201ENST00000396334 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
MYD88-201ENST00000396334 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
MYD88-201ENST00000396334 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
MYD88-201ENST00000396334 CECR2Q9BXF3 1484 aa22.18■■□□□ 1.14
MYD88-201ENST00000396334 NACADO15069 1562 aa22.17■■□□□ 1.14
MYD88-201ENST00000396334 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
MYD88-201ENST00000396334 MYT1Q01538 1121 aa22.13■■□□□ 1.13
MYD88-201ENST00000396334 WIZO95785 1651 aa22.11■■□□□ 1.13
MYD88-201ENST00000396334 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
MYD88-201ENST00000396334 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
MYD88-201ENST00000396334 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
MYD88-201ENST00000396334 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
MYD88-201ENST00000396334 GTF3C3Q9Y5Q9 886 aa21.91■■□□□ 1.1
MYD88-201ENST00000396334 WRNQ14191 1432 aaPredicted RBP eCLIP21.86■■□□□ 1.09
MYD88-201ENST00000396334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
MYD88-201ENST00000396334 TOP2AP11388 1531 aaKnown RBP21.79■■□□□ 1.08
MYD88-201ENST00000396334 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.08
MYD88-201ENST00000396334 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
MYD88-201ENST00000396334 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
MYD88-201ENST00000396334 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
MYD88-201ENST00000396334 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
MYD88-201ENST00000396334 SMARCA4P51532 1647 aa21.67■■□□□ 1.06
MYD88-201ENST00000396334 CENPBP07199 599 aaPredicted RBP21.66■■□□□ 1.06
MYD88-201ENST00000396334 TNIKQ9UKE5 1360 aa21.64■■□□□ 1.06
MYD88-201ENST00000396334 DIEXFQ68CQ4 756 aaKnown RBP21.63■■□□□ 1.05
MYD88-201ENST00000396334 EEA1Q15075 1411 aa21.59■■□□□ 1.05
MYD88-201ENST00000396334 SOGA1O94964 1423 aa21.57■■□□□ 1.04
MYD88-201ENST00000396334 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
MYD88-201ENST00000396334 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
MYD88-201ENST00000396334 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
MYD88-201ENST00000396334 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
MYD88-201ENST00000396334 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
MYD88-201ENST00000396334 TTBK1Q5TCY1 1321 aaPredicted RBP21.36■■□□□ 1.01
MYD88-201ENST00000396334 KIF21BO75037 1637 aa21.35■■□□□ 1.01
MYD88-201ENST00000396334 YTHDC1Q96MU7 727 aaKnown RBP21.33■■□□□ 1.01
MYD88-201ENST00000396334 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
MYD88-201ENST00000396334 UBTFP17480 764 aaKnown RBP21.29■■□□□ 1
MYD88-201ENST00000396334 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
MYD88-201ENST00000396334 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
MYD88-201ENST00000396334 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
MYD88-201ENST00000396334 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
MYD88-201ENST00000396334 CLIP1P30622 1438 aa21.17■□□□□ 0.98
MYD88-201ENST00000396334 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
MYD88-201ENST00000396334 MIER1Q8N108 512 aa21.12■□□□□ 0.97
MYD88-201ENST00000396334 HNRNPUL2Q1KMD3 747 aaKnown RBP21.07■□□□□ 0.96
MYD88-201ENST00000396334 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
MYD88-201ENST00000396334 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
MYD88-201ENST00000396334 CLSPNQ9HAW4 1339 aa20.96■□□□□ 0.95
MYD88-201ENST00000396334 ATAD2BQ9ULI0 1458 aa20.96■□□□□ 0.95
MYD88-201ENST00000396334 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
MYD88-201ENST00000396334 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
MYD88-201ENST00000396334 BCL11AQ9H165 835 aa20.92■□□□□ 0.94
MYD88-201ENST00000396334 APLP2Q06481 763 aa20.89■□□□□ 0.94
MYD88-201ENST00000396334 DHX57Q6P158 1386 aaKnown RBP20.89■□□□□ 0.93
MYD88-201ENST00000396334 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
MYD88-201ENST00000396334 ARAP1Q96P48 1450 aa20.86■□□□□ 0.93
MYD88-201ENST00000396334 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
MYD88-201ENST00000396334 ANP32EQ9BTT0 268 aa20.83■□□□□ 0.93
MYD88-201ENST00000396334 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
MYD88-201ENST00000396334 CUX2O14529 1486 aa20.8■□□□□ 0.92
MYD88-201ENST00000396334 RRBP1Q9P2E9 1410 aaKnown RBP20.79■□□□□ 0.92
MYD88-201ENST00000396334 TSHZ2Q9NRE2 1034 aa20.77■□□□□ 0.92
MYD88-201ENST00000396334 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
MYD88-201ENST00000396334 RANGAP1P46060 587 aaPredicted RBP20.66■□□□□ 0.9
MYD88-201ENST00000396334 CUX1P39880 1505 aa20.64■□□□□ 0.89
MYD88-201ENST00000396334 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
MYD88-201ENST00000396334 ARHGAP35Q9NRY4 1499 aa20.59■□□□□ 0.89
MYD88-201ENST00000396334 KIF27Q86VH2 1401 aa20.57■□□□□ 0.88
MYD88-201ENST00000396334 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
MYD88-201ENST00000396334 MAPKBP1O60336 1514 aa20.54■□□□□ 0.88
MYD88-201ENST00000396334 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
MYD88-201ENST00000396334 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
MYD88-201ENST00000396334 TIAM1Q13009 1591 aa20.47■□□□□ 0.87
MYD88-201ENST00000396334 CFTRP13569 1480 aa20.45■□□□□ 0.86
MYD88-201ENST00000396334 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
MYD88-201ENST00000396334 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
MYD88-201ENST00000396334 BCANQ96GW7 911 aa20.4■□□□□ 0.86
MYD88-201ENST00000396334 SETD5Q9C0A6 1442 aa20.37■□□□□ 0.85
MYD88-201ENST00000396334 CFAP43Q8NDM7 1665 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms