RNA–Protein interactions for RNA: ENST00000421516.1

MYD88-204, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MYD88, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-204ENST00000421516 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
MYD88-204ENST00000421516 CCDC180Q9P1Z9 1646 aa25.48■■□□□ 1.67
MYD88-204ENST00000421516 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
MYD88-204ENST00000421516 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
MYD88-204ENST00000421516 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
MYD88-204ENST00000421516 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
MYD88-204ENST00000421516 ABCC9O60706 1549 aa23.96■■□□□ 1.43
MYD88-204ENST00000421516 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
MYD88-204ENST00000421516 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
MYD88-204ENST00000421516 NACADO15069 1562 aa23.67■■□□□ 1.38
MYD88-204ENST00000421516 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
MYD88-204ENST00000421516 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
MYD88-204ENST00000421516 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
MYD88-204ENST00000421516 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
MYD88-204ENST00000421516 CECR2Q9BXF3 1484 aa22.78■■□□□ 1.24
MYD88-204ENST00000421516 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
MYD88-204ENST00000421516 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
MYD88-204ENST00000421516 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
MYD88-204ENST00000421516 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
MYD88-204ENST00000421516 BAZ1AQ9NRL2 1556 aaPredicted RBP22.61■■□□□ 1.21
MYD88-204ENST00000421516 WIZO95785 1651 aa22.53■■□□□ 1.2
MYD88-204ENST00000421516 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
MYD88-204ENST00000421516 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
MYD88-204ENST00000421516 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
MYD88-204ENST00000421516 PEG3Q9GZU2 1588 aa22.19■■□□□ 1.14
MYD88-204ENST00000421516 EHMT2Q96KQ7 1210 aa22.16■■□□□ 1.14
MYD88-204ENST00000421516 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
MYD88-204ENST00000421516 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
MYD88-204ENST00000421516 ATAD2BQ9ULI0 1458 aa22.07■■□□□ 1.12
MYD88-204ENST00000421516 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
MYD88-204ENST00000421516 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
MYD88-204ENST00000421516 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
MYD88-204ENST00000421516 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
MYD88-204ENST00000421516 PCGF6Q9BYE7 350 aa21.84■■□□□ 1.09
MYD88-204ENST00000421516 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
MYD88-204ENST00000421516 HMGXB3Q12766 1538 aa21.83■■□□□ 1.08
MYD88-204ENST00000421516 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
MYD88-204ENST00000421516 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
MYD88-204ENST00000421516 PPARGC1BQ86YN6 1023 aaKnown RBP21.48■■□□□ 1.03
MYD88-204ENST00000421516 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
MYD88-204ENST00000421516 CFTRP13569 1480 aa21.4■■□□□ 1.02
MYD88-204ENST00000421516 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
MYD88-204ENST00000421516 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
MYD88-204ENST00000421516 HRCP23327 699 aa21.34■■□□□ 1.01
MYD88-204ENST00000421516 SOGA1O94964 1423 aa21.34■■□□□ 1.01
MYD88-204ENST00000421516 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
MYD88-204ENST00000421516 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
MYD88-204ENST00000421516 TRIM26Q12899 539 aaPredicted RBP21.29■■□□□ 1
MYD88-204ENST00000421516 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
MYD88-204ENST00000421516 TOP2BQ02880 1626 aa21.28■■□□□ 1
MYD88-204ENST00000421516 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
MYD88-204ENST00000421516 EEA1Q15075 1411 aa21.23■□□□□ 0.99
MYD88-204ENST00000421516 CUX1P39880 1505 aa21.18■□□□□ 0.98
MYD88-204ENST00000421516 UBTFP17480 764 aaKnown RBP21.17■□□□□ 0.98
MYD88-204ENST00000421516 RANGAP1P46060 587 aaPredicted RBP21.12■□□□□ 0.97
MYD88-204ENST00000421516 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
MYD88-204ENST00000421516 NESP48681 1621 aa21.1■□□□□ 0.97
MYD88-204ENST00000421516 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
MYD88-204ENST00000421516 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.97
MYD88-204ENST00000421516 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.96
MYD88-204ENST00000421516 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
MYD88-204ENST00000421516 KIF21BO75037 1637 aa20.98■□□□□ 0.95
MYD88-204ENST00000421516 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
MYD88-204ENST00000421516 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
MYD88-204ENST00000421516 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
MYD88-204ENST00000421516 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
MYD88-204ENST00000421516 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
MYD88-204ENST00000421516 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
MYD88-204ENST00000421516 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
MYD88-204ENST00000421516 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
MYD88-204ENST00000421516 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
MYD88-204ENST00000421516 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.93
MYD88-204ENST00000421516 CUX2O14529 1486 aa20.83■□□□□ 0.92
MYD88-204ENST00000421516 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
MYD88-204ENST00000421516 PRXQ9BXM0 1461 aa20.8■□□□□ 0.92
MYD88-204ENST00000421516 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
MYD88-204ENST00000421516 ERICH3Q5RHP9 1530 aa20.79■□□□□ 0.92
MYD88-204ENST00000421516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.77■□□□□ 0.92
MYD88-204ENST00000421516 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
MYD88-204ENST00000421516 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
MYD88-204ENST00000421516 IGF1RP08069 1367 aa20.69■□□□□ 0.9
MYD88-204ENST00000421516 CLIP1P30622 1438 aa20.68■□□□□ 0.9
MYD88-204ENST00000421516 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
MYD88-204ENST00000421516 MRC2Q9UBG0 1479 aa20.64■□□□□ 0.89
MYD88-204ENST00000421516 CCER1Q8TC90 406 aaPredicted RBP20.61■□□□□ 0.89
MYD88-204ENST00000421516 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
MYD88-204ENST00000421516 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
MYD88-204ENST00000421516 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
MYD88-204ENST00000421516 CUL7Q14999 1698 aa20.54■□□□□ 0.88
MYD88-204ENST00000421516 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
MYD88-204ENST00000421516 APLP2Q06481 763 aa20.52■□□□□ 0.88
MYD88-204ENST00000421516 WDR62O43379 1518 aa20.52■□□□□ 0.88
MYD88-204ENST00000421516 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.87
MYD88-204ENST00000421516 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
MYD88-204ENST00000421516 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
MYD88-204ENST00000421516 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
MYD88-204ENST00000421516 VPS8Q8N3P4 1428 aa20.48■□□□□ 0.87
MYD88-204ENST00000421516 THOC2Q8NI27 1593 aaKnown RBP20.44■□□□□ 0.86
MYD88-204ENST00000421516 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
MYD88-204ENST00000421516 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms