RNA–Protein interactions for RNA: ENST00000478846.1

CRLS1-205, Transcript of cardiolipin synthase 1, humanhuman

TSL 2

Gene CRLS1, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-205ENST00000478846 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
CRLS1-205ENST00000478846 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
CRLS1-205ENST00000478846 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
CRLS1-205ENST00000478846 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
CRLS1-205ENST00000478846 FOXD1Q16676 465 aa22.95■■□□□ 1.26
CRLS1-205ENST00000478846 POTEDQ86YR6 584 aa21.83■■□□□ 1.09
CRLS1-205ENST00000478846 MSH5O43196 834 aa21.75■■□□□ 1.07
CRLS1-205ENST00000478846 PIAS4Q8N2W9 510 aaPredicted RBP21.39■■□□□ 1.01
CRLS1-205ENST00000478846 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
CRLS1-205ENST00000478846 PPP6R1Q9UPN7 881 aa21.1■□□□□ 0.97
CRLS1-205ENST00000478846 ADRA2BP18089 450 aa21.02■□□□□ 0.96
CRLS1-205ENST00000478846 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
CRLS1-205ENST00000478846 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
CRLS1-205ENST00000478846 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
CRLS1-205ENST00000478846 CACNB1Q02641 598 aaPredicted RBP18.88■□□□□ 0.61
CRLS1-205ENST00000478846 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
CRLS1-205ENST00000478846 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
CRLS1-205ENST00000478846 HOXD11P31277 338 aaPredicted RBP18.58■□□□□ 0.56
CRLS1-205ENST00000478846 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
CRLS1-205ENST00000478846 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
CRLS1-205ENST00000478846 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
CRLS1-205ENST00000478846 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
CRLS1-205ENST00000478846 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
CRLS1-205ENST00000478846 NCBP3Q53F19 620 aaKnown RBP17.88■□□□□ 0.45
CRLS1-205ENST00000478846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.43
CRLS1-205ENST00000478846 KCNA4P22459 653 aa17.67■□□□□ 0.42
CRLS1-205ENST00000478846 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
CRLS1-205ENST00000478846 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
CRLS1-205ENST00000478846 CAPN15O75808 1086 aa17.16■□□□□ 0.34
CRLS1-205ENST00000478846 DSG3P32926 999 aa17.13■□□□□ 0.33
CRLS1-205ENST00000478846 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
CRLS1-205ENST00000478846 POTEHQ6S545 545 aa17.06■□□□□ 0.32
CRLS1-205ENST00000478846 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
CRLS1-205ENST00000478846 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
CRLS1-205ENST00000478846 APLP2Q06481 763 aa16.89■□□□□ 0.29
CRLS1-205ENST00000478846 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
CRLS1-205ENST00000478846 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
CRLS1-205ENST00000478846 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
CRLS1-205ENST00000478846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
CRLS1-205ENST00000478846 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
CRLS1-205ENST00000478846 ABCB7O75027 752 aa16.67■□□□□ 0.26
CRLS1-205ENST00000478846 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
CRLS1-205ENST00000478846 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
CRLS1-205ENST00000478846 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
CRLS1-205ENST00000478846 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
CRLS1-205ENST00000478846 POLA2Q14181 598 aa16.23■□□□□ 0.19
CRLS1-205ENST00000478846 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
CRLS1-205ENST00000478846 ZBTB22O15209 634 aa16.22■□□□□ 0.19
CRLS1-205ENST00000478846 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
CRLS1-205ENST00000478846 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
CRLS1-205ENST00000478846 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
CRLS1-205ENST00000478846 SP7Q8TDD2 431 aaPredicted RBP15.81■□□□□ 0.12
CRLS1-205ENST00000478846 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
CRLS1-205ENST00000478846 REM2Q8IYK8 340 aaPredicted RBP15.76■□□□□ 0.11
CRLS1-205ENST00000478846 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
CRLS1-205ENST00000478846 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
CRLS1-205ENST00000478846 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
CRLS1-205ENST00000478846 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
CRLS1-205ENST00000478846 HAX1O00165 279 aa15.56■□□□□ 0.08
CRLS1-205ENST00000478846 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.08
CRLS1-205ENST00000478846 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
CRLS1-205ENST00000478846 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
CRLS1-205ENST00000478846 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
CRLS1-205ENST00000478846 FBLN2P98095 1184 aa15.37■□□□□ 0.05
CRLS1-205ENST00000478846 SPDYE1Q8NFV5 336 aaPredicted RBP15.24■□□□□ 0.03
CRLS1-205ENST00000478846 EVX2Q03828 476 aa15.22■□□□□ 0.03
CRLS1-205ENST00000478846 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
CRLS1-205ENST00000478846 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
CRLS1-205ENST00000478846 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
CRLS1-205ENST00000478846 SSUH2Q9Y2M2 353 aa15.1■□□□□ 0.01
CRLS1-205ENST00000478846 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
CRLS1-205ENST00000478846 C19orf67A6NJJ6 358 aa15.06■□□□□ 0
CRLS1-205ENST00000478846 FKBP8Q14318 412 aa14.96□□□□□ -0.01
CRLS1-205ENST00000478846 GABBR2O75899 941 aa14.93□□□□□ -0.02
CRLS1-205ENST00000478846 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
CRLS1-205ENST00000478846 CHADLQ6NUI6 762 aa14.88□□□□□ -0.03
CRLS1-205ENST00000478846 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
CRLS1-205ENST00000478846 LHX8Q68G74 356 aa14.82□□□□□ -0.04
CRLS1-205ENST00000478846 CLCN6P51797 869 aa14.71□□□□□ -0.05
CRLS1-205ENST00000478846 CD44P16070 742 aaKnown RBP14.7□□□□□ -0.06
CRLS1-205ENST00000478846 FARP1Q9Y4F1 1045 aaPredicted RBP14.68□□□□□ -0.06
CRLS1-205ENST00000478846 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
CRLS1-205ENST00000478846 SPDYE4A6NLX3 237 aa14.55□□□□□ -0.08
CRLS1-205ENST00000478846 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
CRLS1-205ENST00000478846 DCBLD2Q96PD2 775 aa14.51□□□□□ -0.09
CRLS1-205ENST00000478846 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
CRLS1-205ENST00000478846 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
CRLS1-205ENST00000478846 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
CRLS1-205ENST00000478846 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
CRLS1-205ENST00000478846 PROM2Q8N271 834 aa14.39□□□□□ -0.11
CRLS1-205ENST00000478846 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
CRLS1-205ENST00000478846 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
CRLS1-205ENST00000478846 PAK3O75914 559 aaPredicted RBP14.3□□□□□ -0.12
CRLS1-205ENST00000478846 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
CRLS1-205ENST00000478846 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
CRLS1-205ENST00000478846 PLSCR2Q9NRY7 297 aa14.19□□□□□ -0.14
CRLS1-205ENST00000478846 VASPP50552 380 aaPredicted RBP14.15□□□□□ -0.14
CRLS1-205ENST00000478846 OTUD5Q96G74 571 aa14.14□□□□□ -0.15
CRLS1-205ENST00000478846 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
CRLS1-205ENST00000478846 POTEB2H3BUK9 544 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms