RNA–Protein interactions for RNA: ENST00000443433.6

MYD88-206, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

TSL 1 (best) BASIC

Gene MYD88, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-206ENST00000443433 NISCHQ9Y2I1 1504 aa44.7■■■■■ 4.75
MYD88-206ENST00000443433 CCDC180Q9P1Z9 1646 aa39.73■■■■□ 3.95
MYD88-206ENST00000443433 ABCC9O60706 1549 aa39■■■■□ 3.83
MYD88-206ENST00000443433 RB1CC1Q8TDY2 1594 aa37.43■■■■□ 3.58
MYD88-206ENST00000443433 DCAF8L2P0C7V8 631 aa37.43■■■■□ 3.58
MYD88-206ENST00000443433 NACADO15069 1562 aa37.38■■■■□ 3.57
MYD88-206ENST00000443433 ZCCHC6Q5VYS8 1495 aaKnown RBP37.22■■■■□ 3.55
MYD88-206ENST00000443433 MYO15BQ96JP2 1530 aa37.11■■■■□ 3.53
MYD88-206ENST00000443433 DCAF1Q9Y4B6 1507 aa36.95■■■■□ 3.5
MYD88-206ENST00000443433 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
MYD88-206ENST00000443433 PABPN1Q86U42 306 aaKnown RBP eCLIP36.47■■■■□ 3.43
MYD88-206ENST00000443433 BICRAQ9NZM4 1560 aa36.36■■■■□ 3.41
MYD88-206ENST00000443433 SCRIBQ14160 1630 aa36.3■■■■□ 3.4
MYD88-206ENST00000443433 DNAJC5BQ9UF47 199 aa35.92■■■■□ 3.34
MYD88-206ENST00000443433 SHROOM4Q9ULL8 1493 aa35.86■■■■□ 3.33
MYD88-206ENST00000443433 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
MYD88-206ENST00000443433 CC2D2AQ9P2K1 1620 aa35.27■■■■□ 3.24
MYD88-206ENST00000443433 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
MYD88-206ENST00000443433 SMARCA4P51532 1647 aa34.7■■■■□ 3.15
MYD88-206ENST00000443433 BAZ1AQ9NRL2 1556 aaPredicted RBP34.63■■■■□ 3.13
MYD88-206ENST00000443433 ATAD2BQ9ULI0 1458 aa34.53■■■■□ 3.12
MYD88-206ENST00000443433 NCAPD3P42695 1498 aa34.52■■■■□ 3.12
MYD88-206ENST00000443433 MROH2BQ7Z745 1585 aa34.48■■■■□ 3.11
MYD88-206ENST00000443433 SMARCA2P51531 1590 aa34.45■■■■□ 3.1
MYD88-206ENST00000443433 PEG3Q9GZU2 1588 aa34.35■■■■□ 3.09
MYD88-206ENST00000443433 HMGXB3Q12766 1538 aa34.31■■■■□ 3.08
MYD88-206ENST00000443433 BAZ1BQ9UIG0 1483 aaKnown RBP34.23■■■■□ 3.07
MYD88-206ENST00000443433 WIZO95785 1651 aa34.12■■■■□ 3.05
MYD88-206ENST00000443433 RSF1Q96T23 1441 aaPredicted RBP34.05■■■■□ 3.04
MYD88-206ENST00000443433 NESP48681 1621 aa33.75■■■□□ 2.99
MYD88-206ENST00000443433 TOP2AP11388 1531 aaKnown RBP33.7■■■□□ 2.99
MYD88-206ENST00000443433 LAMC3Q9Y6N6 1575 aa33.6■■■□□ 2.97
MYD88-206ENST00000443433 ERCC6Q03468 1493 aa33.57■■■□□ 2.97
MYD88-206ENST00000443433 CADPSQ9ULU8 1353 aa33.51■■■□□ 2.96
MYD88-206ENST00000443433 PDS5BQ9NTI5 1447 aa33.36■■■□□ 2.93
MYD88-206ENST00000443433 KIF21AQ7Z4S6 1674 aa33.34■■■□□ 2.93
MYD88-206ENST00000443433 CCDC88BA6NC98 1476 aa33.34■■■□□ 2.93
MYD88-206ENST00000443433 CFTRP13569 1480 aa33.3■■■□□ 2.92
MYD88-206ENST00000443433 CUX2O14529 1486 aa33.23■■■□□ 2.91
MYD88-206ENST00000443433 THOC2Q8NI27 1593 aaKnown RBP33.21■■■□□ 2.91
MYD88-206ENST00000443433 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
MYD88-206ENST00000443433 FANCD2Q9BXW9 1451 aa33.12■■■□□ 2.89
MYD88-206ENST00000443433 CEP164Q9UPV0 1460 aa33.07■■■□□ 2.88
MYD88-206ENST00000443433 MRC2Q9UBG0 1479 aa33.05■■■□□ 2.88
MYD88-206ENST00000443433 PRDM2Q13029 1718 aa33.02■■■□□ 2.88
MYD88-206ENST00000443433 WDR62O43379 1518 aa32.94■■■□□ 2.86
MYD88-206ENST00000443433 URB2Q14146 1524 aaKnown RBP32.82■■■□□ 2.84
MYD88-206ENST00000443433 TOPBP1Q92547 1522 aa32.6■■■□□ 2.81
MYD88-206ENST00000443433 ABCC8Q09428 1581 aa32.54■■■□□ 2.8
MYD88-206ENST00000443433 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
MYD88-206ENST00000443433 IFT140Q96RY7 1462 aa32.38■■■□□ 2.77
MYD88-206ENST00000443433 DNAJC5Q9H3Z4 198 aa32.34■■■□□ 2.77
MYD88-206ENST00000443433 CUX1P39880 1505 aa32.34■■■□□ 2.77
MYD88-206ENST00000443433 POLA1P09884 1462 aaPredicted RBP32.32■■■□□ 2.76
MYD88-206ENST00000443433 ZNF608Q9ULD9 1512 aaPredicted RBP32.29■■■□□ 2.76
MYD88-206ENST00000443433 TARBP1Q13395 1621 aaKnown RBP32.25■■■□□ 2.75
MYD88-206ENST00000443433 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
MYD88-206ENST00000443433 RAD54L2Q9Y4B4 1467 aa32.21■■■□□ 2.75
MYD88-206ENST00000443433 SOGA1O94964 1423 aa32.18■■■□□ 2.74
MYD88-206ENST00000443433 EIF4G3O43432 1585 aaKnown RBP32.13■■■□□ 2.73
MYD88-206ENST00000443433 AQRO60306 1485 aaKnown RBP eCLIP32.1■■■□□ 2.731e-6■■■■■ 35.7
MYD88-206ENST00000443433 WRNQ14191 1432 aaPredicted RBP eCLIP32.09■■■□□ 2.73
MYD88-206ENST00000443433 SYNJ1O43426 1573 aa32.04■■■□□ 2.72
MYD88-206ENST00000443433 TDRD9Q8NDG6 1382 aaKnown RBP32.03■■■□□ 2.72
MYD88-206ENST00000443433 TOP2BQ02880 1626 aa32.02■■■□□ 2.72
MYD88-206ENST00000443433 BIVM-ERCC5R4GMW8 1640 aa32.02■■■□□ 2.72
MYD88-206ENST00000443433 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
MYD88-206ENST00000443433 ABCA10Q8WWZ4 1543 aa31.9■■■□□ 2.7
MYD88-206ENST00000443433 OSCARQ8IYS5 282 aa31.88■■■□□ 2.69
MYD88-206ENST00000443433 GAPVD1Q14C86 1478 aa31.8■■■□□ 2.68
MYD88-206ENST00000443433 GRIN2BQ13224 1484 aa31.79■■■□□ 2.68
MYD88-206ENST00000443433 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
MYD88-206ENST00000443433 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
MYD88-206ENST00000443433 CHD1O14646 1710 aa31.75■■■□□ 2.67
MYD88-206ENST00000443433 PBRM1Q86U86 1689 aa31.74■■■□□ 2.67
MYD88-206ENST00000443433 FBLN2P98095 1184 aa31.72■■■□□ 2.67
MYD88-206ENST00000443433 MAGI1Q96QZ7 1491 aaPredicted RBP31.7■■■□□ 2.66
MYD88-206ENST00000443433 CHMP7Q8WUX9 453 aaPredicted RBP31.61■■■□□ 2.65
MYD88-206ENST00000443433 SYNJ2O15056 1496 aa31.59■■■□□ 2.65
MYD88-206ENST00000443433 ERICH3Q5RHP9 1530 aa31.5■■■□□ 2.63
MYD88-206ENST00000443433 ADAMTS12P58397 1594 aa31.47■■■□□ 2.63
MYD88-206ENST00000443433 FHAD1B1AJZ9 1412 aa31.41■■■□□ 2.62
MYD88-206ENST00000443433 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
MYD88-206ENST00000443433 GRIN2AQ12879 1464 aa31.4■■■□□ 2.62
MYD88-206ENST00000443433 CLASP1Q7Z460 1538 aa31.39■■■□□ 2.61
MYD88-206ENST00000443433 RIMBP3CA6NJZ7 1639 aa31.38■■■□□ 2.61
MYD88-206ENST00000443433 RIMBP3BA6NNM3 1639 aa31.38■■■□□ 2.61
MYD88-206ENST00000443433 RIMBP3Q9UFD9 1639 aa31.38■■■□□ 2.61
MYD88-206ENST00000443433 ARHGEF11O15085 1522 aa31.36■■■□□ 2.61
MYD88-206ENST00000443433 IGF1RP08069 1367 aa31.33■■■□□ 2.61
MYD88-206ENST00000443433 TRIM41Q8WV44 630 aa31.31■■■□□ 2.6
MYD88-206ENST00000443433 CEP170Q5SW79 1584 aa31.26■■■□□ 2.6
MYD88-206ENST00000443433 NUP160Q12769 1436 aa31.26■■■□□ 2.6
MYD88-206ENST00000443433 CUL7Q14999 1698 aa31.19■■■□□ 2.58
MYD88-206ENST00000443433 RUSC2Q8N2Y8 1516 aa31.19■■■□□ 2.58
MYD88-206ENST00000443433 CARMIL1Q5VZK9 1371 aa31.14■■■□□ 2.58
MYD88-206ENST00000443433 ARAP1Q96P48 1450 aa31.12■■■□□ 2.57
MYD88-206ENST00000443433 CYB5RLQ6IPT4 315 aa31.11■■■□□ 2.57
MYD88-206ENST00000443433 SHROOM2Q13796 1616 aa31.03■■■□□ 2.56
MYD88-206ENST00000443433 ERCC6L2Q5T890 1561 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms