RNA–Protein interactions for RNA: ENST00000452938.5

CRLS1-203, Transcript of cardiolipin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CRLS1, Length 3,859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-203ENST00000452938 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
CRLS1-203ENST00000452938 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
CRLS1-203ENST00000452938 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
CRLS1-203ENST00000452938 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
CRLS1-203ENST00000452938 EHMT2Q96KQ7 1210 aa25.77■■□□□ 1.72
CRLS1-203ENST00000452938 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
CRLS1-203ENST00000452938 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
CRLS1-203ENST00000452938 ABCC9O60706 1549 aa25.21■■□□□ 1.63
CRLS1-203ENST00000452938 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
CRLS1-203ENST00000452938 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
CRLS1-203ENST00000452938 LOC105371045A0A1W2PR82 267 aa24.93■■□□□ 1.58
CRLS1-203ENST00000452938 TTBK1Q5TCY1 1321 aaPredicted RBP24.79■■□□□ 1.56
CRLS1-203ENST00000452938 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
CRLS1-203ENST00000452938 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
CRLS1-203ENST00000452938 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
CRLS1-203ENST00000452938 PPARGC1BQ86YN6 1023 aaKnown RBP24.64■■□□□ 1.54
CRLS1-203ENST00000452938 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
CRLS1-203ENST00000452938 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
CRLS1-203ENST00000452938 HRCP23327 699 aa24.46■■□□□ 1.51
CRLS1-203ENST00000452938 TRIM26Q12899 539 aaPredicted RBP24.12■■□□□ 1.45
CRLS1-203ENST00000452938 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
CRLS1-203ENST00000452938 UBTFP17480 764 aaKnown RBP24.07■■□□□ 1.44
CRLS1-203ENST00000452938 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
CRLS1-203ENST00000452938 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
CRLS1-203ENST00000452938 CECR2Q9BXF3 1484 aa23.84■■□□□ 1.41
CRLS1-203ENST00000452938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.76■■□□□ 1.39
CRLS1-203ENST00000452938 APLP2Q06481 763 aa23.74■■□□□ 1.39
CRLS1-203ENST00000452938 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
CRLS1-203ENST00000452938 DCAF1Q9Y4B6 1507 aa23.7■■□□□ 1.38
CRLS1-203ENST00000452938 ATP1B4Q9UN42 357 aaPredicted RBP23.61■■□□□ 1.37
CRLS1-203ENST00000452938 NACADO15069 1562 aa23.53■■□□□ 1.36
CRLS1-203ENST00000452938 YTHDC1Q96MU7 727 aaKnown RBP23.52■■□□□ 1.36
CRLS1-203ENST00000452938 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
CRLS1-203ENST00000452938 HNRNPUL2Q1KMD3 747 aaKnown RBP23.5■■□□□ 1.35
CRLS1-203ENST00000452938 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
CRLS1-203ENST00000452938 ITGAEP38570 1179 aa23.32■■□□□ 1.32
CRLS1-203ENST00000452938 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
CRLS1-203ENST00000452938 WIZO95785 1651 aa23.22■■□□□ 1.31
CRLS1-203ENST00000452938 CENPBP07199 599 aaPredicted RBP23.18■■□□□ 1.3
CRLS1-203ENST00000452938 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
CRLS1-203ENST00000452938 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
CRLS1-203ENST00000452938 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
CRLS1-203ENST00000452938 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
CRLS1-203ENST00000452938 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
CRLS1-203ENST00000452938 SOGA1O94964 1423 aa22.96■■□□□ 1.27
CRLS1-203ENST00000452938 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
CRLS1-203ENST00000452938 ARID3CA6NKF2 412 aa22.84■■□□□ 1.25
CRLS1-203ENST00000452938 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.25
CRLS1-203ENST00000452938 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
CRLS1-203ENST00000452938 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
CRLS1-203ENST00000452938 CEP162Q5TB80 1403 aa22.72■■□□□ 1.23
CRLS1-203ENST00000452938 FAM50AQ14320 339 aaKnown RBP22.71■■□□□ 1.23
CRLS1-203ENST00000452938 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
CRLS1-203ENST00000452938 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
CRLS1-203ENST00000452938 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
CRLS1-203ENST00000452938 ZNF316A6NFI3 1004 aaPredicted RBP22.64■■□□□ 1.21
CRLS1-203ENST00000452938 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
CRLS1-203ENST00000452938 FBLN2P98095 1184 aa22.63■■□□□ 1.21
CRLS1-203ENST00000452938 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
CRLS1-203ENST00000452938 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
CRLS1-203ENST00000452938 CLIP1P30622 1438 aa22.57■■□□□ 1.2
CRLS1-203ENST00000452938 CNGB1Q14028 1251 aaPredicted RBP22.53■■□□□ 1.2
CRLS1-203ENST00000452938 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.19
CRLS1-203ENST00000452938 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
CRLS1-203ENST00000452938 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
CRLS1-203ENST00000452938 TNIKQ9UKE5 1360 aa22.45■■□□□ 1.18
CRLS1-203ENST00000452938 MIER1Q8N108 512 aa22.4■■□□□ 1.18
CRLS1-203ENST00000452938 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.17
CRLS1-203ENST00000452938 BCANQ96GW7 911 aa22.33■■□□□ 1.16
CRLS1-203ENST00000452938 EEA1Q15075 1411 aa22.32■■□□□ 1.16
CRLS1-203ENST00000452938 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
CRLS1-203ENST00000452938 POLR3GLQ9BT43 218 aa22.29■■□□□ 1.16
CRLS1-203ENST00000452938 KANK4Q5T7N3 995 aaPredicted RBP22.27■■□□□ 1.16
CRLS1-203ENST00000452938 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.16
CRLS1-203ENST00000452938 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
CRLS1-203ENST00000452938 CUX2O14529 1486 aa22.26■■□□□ 1.15
CRLS1-203ENST00000452938 HIRIP3Q9BW71 556 aaPredicted RBP22.26■■□□□ 1.15
CRLS1-203ENST00000452938 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
CRLS1-203ENST00000452938 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
CRLS1-203ENST00000452938 TRIM52Q96A61 297 aa22.21■■□□□ 1.15
CRLS1-203ENST00000452938 NEFLP07196 543 aa22.18■■□□□ 1.14
CRLS1-203ENST00000452938 CHIC2Q9UKJ5 165 aa22.18■■□□□ 1.14
CRLS1-203ENST00000452938 TDRD9Q8NDG6 1382 aaKnown RBP22.14■■□□□ 1.14
CRLS1-203ENST00000452938 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
CRLS1-203ENST00000452938 ZNF777Q9ULD5 760 aaPredicted RBP22.11■■□□□ 1.13
CRLS1-203ENST00000452938 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
CRLS1-203ENST00000452938 DDX10Q13206 875 aaKnown RBP22.09■■□□□ 1.13
CRLS1-203ENST00000452938 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
CRLS1-203ENST00000452938 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
CRLS1-203ENST00000452938 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
CRLS1-203ENST00000452938 VPS8Q8N3P4 1428 aa22.01■■□□□ 1.11
CRLS1-203ENST00000452938 ZNF326Q5BKZ1 582 aaKnown RBP21.99■■□□□ 1.11
CRLS1-203ENST00000452938 NESP48681 1621 aa21.96■■□□□ 1.11
CRLS1-203ENST00000452938 NCAPD3P42695 1498 aa21.95■■□□□ 1.11
CRLS1-203ENST00000452938 RRP7BPQ9NSQ0 103 aa21.94■■□□□ 1.1
CRLS1-203ENST00000452938 MTUS2Q5JR59 1369 aa21.94■■□□□ 1.1
CRLS1-203ENST00000452938 SIN3AQ96ST3 1273 aa21.94■■□□□ 1.1
CRLS1-203ENST00000452938 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
CRLS1-203ENST00000452938 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
CRLS1-203ENST00000452938 FANCD2Q9BXW9 1451 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms