RNA–Protein interactions for RNA: ENST00000565282.5

NPTN-208, Transcript of neuroplastin, humanhuman

TSL 1 (best)

Gene NPTN, Length 1,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-208ENST00000565282 NISCHQ9Y2I1 1504 aa40.53■■■■■ 4.08
NPTN-208ENST00000565282 CCDC180Q9P1Z9 1646 aa36.04■■■■□ 3.36
NPTN-208ENST00000565282 ABCC9O60706 1549 aa35■■■■□ 3.19
NPTN-208ENST00000565282 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
NPTN-208ENST00000565282 RB1CC1Q8TDY2 1594 aa33.77■■■■□ 3
NPTN-208ENST00000565282 NACADO15069 1562 aa33.77■■■■□ 3
NPTN-208ENST00000565282 DCAF8L2P0C7V8 631 aa33.67■■■□□ 2.98
NPTN-208ENST00000565282 MYO15BQ96JP2 1530 aa33.62■■■□□ 2.97
NPTN-208ENST00000565282 DCAF1Q9Y4B6 1507 aa33.56■■■□□ 2.96
NPTN-208ENST00000565282 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
NPTN-208ENST00000565282 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
NPTN-208ENST00000565282 BICRAQ9NZM4 1560 aa32.77■■■□□ 2.84
NPTN-208ENST00000565282 PABPN1Q86U42 306 aaKnown RBP eCLIP32.67■■■□□ 2.82
NPTN-208ENST00000565282 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
NPTN-208ENST00000565282 DNAJC5BQ9UF47 199 aa31.88■■■□□ 2.69
NPTN-208ENST00000565282 EIF4G1Q04637 1599 aaKnown RBP31.88■■■□□ 2.69
NPTN-208ENST00000565282 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
NPTN-208ENST00000565282 CECR2Q9BXF3 1484 aa31.55■■■□□ 2.64
NPTN-208ENST00000565282 SMARCA4P51532 1647 aa31.46■■■□□ 2.63
NPTN-208ENST00000565282 BAZ1AQ9NRL2 1556 aaPredicted RBP31.42■■■□□ 2.62
NPTN-208ENST00000565282 MROH2BQ7Z745 1585 aa31.25■■■□□ 2.59
NPTN-208ENST00000565282 ATAD2BQ9ULI0 1458 aa31.19■■■□□ 2.58
NPTN-208ENST00000565282 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
NPTN-208ENST00000565282 PEG3Q9GZU2 1588 aa31.14■■■□□ 2.58
NPTN-208ENST00000565282 NCAPD3P42695 1498 aa31.12■■■□□ 2.57
NPTN-208ENST00000565282 HMGXB3Q12766 1538 aa31.04■■■□□ 2.56
NPTN-208ENST00000565282 WIZO95785 1651 aa30.97■■■□□ 2.55
NPTN-208ENST00000565282 BAZ1BQ9UIG0 1483 aaKnown RBP30.95■■■□□ 2.54
NPTN-208ENST00000565282 RSF1Q96T23 1441 aaPredicted RBP30.92■■■□□ 2.54
NPTN-208ENST00000565282 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
NPTN-208ENST00000565282 NESP48681 1621 aa30.35■■■□□ 2.45
NPTN-208ENST00000565282 LAMC3Q9Y6N6 1575 aa30.32■■■□□ 2.45
NPTN-208ENST00000565282 SUPT5HO00267 1087 aaKnown RBP30.22■■■□□ 2.43
NPTN-208ENST00000565282 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
NPTN-208ENST00000565282 CADPSQ9ULU8 1353 aa30.2■■■□□ 2.43
NPTN-208ENST00000565282 ERCC6Q03468 1493 aa30.13■■■□□ 2.41
NPTN-208ENST00000565282 CFTRP13569 1480 aa30.1■■■□□ 2.41
NPTN-208ENST00000565282 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
NPTN-208ENST00000565282 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
NPTN-208ENST00000565282 PRDM2Q13029 1718 aa30.04■■■□□ 2.4
NPTN-208ENST00000565282 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
NPTN-208ENST00000565282 FANCD2Q9BXW9 1451 aa29.89■■■□□ 2.38
NPTN-208ENST00000565282 CEP164Q9UPV0 1460 aa29.86■■■□□ 2.37
NPTN-208ENST00000565282 MRC2Q9UBG0 1479 aa29.77■■■□□ 2.36
NPTN-208ENST00000565282 CUX2O14529 1486 aa29.76■■■□□ 2.35
NPTN-208ENST00000565282 WDR62O43379 1518 aa29.7■■■□□ 2.34
NPTN-208ENST00000565282 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
NPTN-208ENST00000565282 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
NPTN-208ENST00000565282 TOPBP1Q92547 1522 aa29.45■■■□□ 2.31
NPTN-208ENST00000565282 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
NPTN-208ENST00000565282 CUX1P39880 1505 aa29.31■■■□□ 2.28
NPTN-208ENST00000565282 POLA1P09884 1462 aaPredicted RBP29.22■■■□□ 2.27
NPTN-208ENST00000565282 IFT140Q96RY7 1462 aa29.2■■■□□ 2.26
NPTN-208ENST00000565282 FGD5Q6ZNL6 1462 aa29.17■■■□□ 2.26
NPTN-208ENST00000565282 TARBP1Q13395 1621 aaKnown RBP29.16■■■□□ 2.26
NPTN-208ENST00000565282 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
NPTN-208ENST00000565282 WRNQ14191 1432 aaPredicted RBP eCLIP29.15■■■□□ 2.26
NPTN-208ENST00000565282 SYNJ1O43426 1573 aa29.14■■■□□ 2.26
NPTN-208ENST00000565282 TOP2BQ02880 1626 aa29.12■■■□□ 2.25
NPTN-208ENST00000565282 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
NPTN-208ENST00000565282 RAD54L2Q9Y4B4 1467 aa29.07■■■□□ 2.24
NPTN-208ENST00000565282 SOGA1O94964 1423 aa29.04■■■□□ 2.24
NPTN-208ENST00000565282 EIF4G3O43432 1585 aaKnown RBP29.03■■■□□ 2.24
NPTN-208ENST00000565282 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
NPTN-208ENST00000565282 AQRO60306 1485 aaKnown RBP eCLIP28.91■■■□□ 2.222e-6■■□□□ 13.1
NPTN-208ENST00000565282 ABCA10Q8WWZ4 1543 aa28.89■■■□□ 2.22
NPTN-208ENST00000565282 TDRD9Q8NDG6 1382 aaKnown RBP28.86■■■□□ 2.21
NPTN-208ENST00000565282 ABCA5Q8WWZ7 1642 aa28.82■■■□□ 2.2
NPTN-208ENST00000565282 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
NPTN-208ENST00000565282 GAPVD1Q14C86 1478 aa28.75■■■□□ 2.19
NPTN-208ENST00000565282 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
NPTN-208ENST00000565282 SNAPC4Q5SXM2 1469 aa28.67■■■□□ 2.18
NPTN-208ENST00000565282 CHD1O14646 1710 aa28.65■■■□□ 2.18
NPTN-208ENST00000565282 MAGI1Q96QZ7 1491 aaPredicted RBP28.63■■■□□ 2.17
NPTN-208ENST00000565282 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
NPTN-208ENST00000565282 DNAJC5Q9H3Z4 198 aa28.55■■■□□ 2.16
NPTN-208ENST00000565282 TRIM41Q8WV44 630 aa28.53■■■□□ 2.16
NPTN-208ENST00000565282 ADAMTS12P58397 1594 aa28.53■■■□□ 2.16
NPTN-208ENST00000565282 SYNJ2O15056 1496 aa28.52■■■□□ 2.16
NPTN-208ENST00000565282 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
NPTN-208ENST00000565282 OSCARQ8IYS5 282 aa28.47■■■□□ 2.15
NPTN-208ENST00000565282 FBLN2P98095 1184 aa28.46■■■□□ 2.15
NPTN-208ENST00000565282 CHMP7Q8WUX9 453 aaPredicted RBP28.42■■■□□ 2.14
NPTN-208ENST00000565282 FHAD1B1AJZ9 1412 aa28.41■■■□□ 2.14
NPTN-208ENST00000565282 CUL7Q14999 1698 aa28.38■■■□□ 2.13
NPTN-208ENST00000565282 GRIN2AQ12879 1464 aa28.37■■■□□ 2.13
NPTN-208ENST00000565282 IGF1RP08069 1367 aa28.36■■■□□ 2.13
NPTN-208ENST00000565282 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
NPTN-208ENST00000565282 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
NPTN-208ENST00000565282 CLASP1Q7Z460 1538 aa28.29■■■□□ 2.12
NPTN-208ENST00000565282 CEP170Q5SW79 1584 aa28.25■■■□□ 2.11
NPTN-208ENST00000565282 NUP160Q12769 1436 aa28.23■■■□□ 2.11
NPTN-208ENST00000565282 CARMIL1Q5VZK9 1371 aa28.2■■■□□ 2.1
NPTN-208ENST00000565282 RIMBP3CA6NJZ7 1639 aa28.14■■■□□ 2.09
NPTN-208ENST00000565282 RIMBP3BA6NNM3 1639 aa28.14■■■□□ 2.09
NPTN-208ENST00000565282 RIMBP3Q9UFD9 1639 aa28.14■■■□□ 2.09
NPTN-208ENST00000565282 ARHGEF11O15085 1522 aa28.12■■■□□ 2.09
NPTN-208ENST00000565282 EEA1Q15075 1411 aa28.09■■■□□ 2.09
NPTN-208ENST00000565282 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.09
NPTN-208ENST00000565282 SHROOM2Q13796 1616 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms