RNA–Protein interactions for RNA: ENST00000484513.1

MYD88-210, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

TSL 2

Gene MYD88, Length 3,314 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-210ENST00000484513 NISCHQ9Y2I1 1504 aa20.51■□□□□ 0.87
MYD88-210ENST00000484513 CCDC180Q9P1Z9 1646 aa17.71■□□□□ 0.43
MYD88-210ENST00000484513 DCAF8L2P0C7V8 631 aa17.56■□□□□ 0.4
MYD88-210ENST00000484513 ABCC9O60706 1549 aa17.33■□□□□ 0.36
MYD88-210ENST00000484513 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
MYD88-210ENST00000484513 SHROOM4Q9ULL8 1493 aa17.08■□□□□ 0.32
MYD88-210ENST00000484513 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
MYD88-210ENST00000484513 NACADO15069 1562 aa16.65■□□□□ 0.26
MYD88-210ENST00000484513 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
MYD88-210ENST00000484513 RB1CC1Q8TDY2 1594 aa16.59■□□□□ 0.25
MYD88-210ENST00000484513 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.24
MYD88-210ENST00000484513 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
MYD88-210ENST00000484513 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
MYD88-210ENST00000484513 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
MYD88-210ENST00000484513 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
MYD88-210ENST00000484513 BICRAQ9NZM4 1560 aa16.08■□□□□ 0.17
MYD88-210ENST00000484513 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
MYD88-210ENST00000484513 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
MYD88-210ENST00000484513 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
MYD88-210ENST00000484513 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
MYD88-210ENST00000484513 WIZO95785 1651 aa15.75■□□□□ 0.11
MYD88-210ENST00000484513 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
MYD88-210ENST00000484513 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
MYD88-210ENST00000484513 BAZ1BQ9UIG0 1483 aaKnown RBP15.56■□□□□ 0.08
MYD88-210ENST00000484513 SMARCA2P51531 1590 aa15.51■□□□□ 0.07
MYD88-210ENST00000484513 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
MYD88-210ENST00000484513 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
MYD88-210ENST00000484513 CC2D2AQ9P2K1 1620 aa15.49■□□□□ 0.07
MYD88-210ENST00000484513 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
MYD88-210ENST00000484513 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
MYD88-210ENST00000484513 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
MYD88-210ENST00000484513 PEG3Q9GZU2 1588 aa15.44■□□□□ 0.06
MYD88-210ENST00000484513 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
MYD88-210ENST00000484513 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
MYD88-210ENST00000484513 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
MYD88-210ENST00000484513 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
MYD88-210ENST00000484513 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
MYD88-210ENST00000484513 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
MYD88-210ENST00000484513 NESP48681 1621 aa15.14■□□□□ 0.01
MYD88-210ENST00000484513 CFTRP13569 1480 aa15.09■□□□□ 0.01
MYD88-210ENST00000484513 WRNQ14191 1432 aaPredicted RBP eCLIP15.04■□□□□ -0
MYD88-210ENST00000484513 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
MYD88-210ENST00000484513 FANCD2Q9BXW9 1451 aa14.98□□□□□ -0.01
MYD88-210ENST00000484513 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
MYD88-210ENST00000484513 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
MYD88-210ENST00000484513 SOGA1O94964 1423 aa14.9□□□□□ -0.02
MYD88-210ENST00000484513 LAMC3Q9Y6N6 1575 aa14.88□□□□□ -0.03
MYD88-210ENST00000484513 CEP164Q9UPV0 1460 aa14.87□□□□□ -0.03
MYD88-210ENST00000484513 CUX1P39880 1505 aa14.86□□□□□ -0.03
MYD88-210ENST00000484513 ERCC6Q03468 1493 aa14.86□□□□□ -0.03
MYD88-210ENST00000484513 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
MYD88-210ENST00000484513 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
MYD88-210ENST00000484513 TOP2BQ02880 1626 aa14.78□□□□□ -0.04
MYD88-210ENST00000484513 FGD5Q6ZNL6 1462 aa14.77□□□□□ -0.05
MYD88-210ENST00000484513 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
MYD88-210ENST00000484513 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
MYD88-210ENST00000484513 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
MYD88-210ENST00000484513 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
MYD88-210ENST00000484513 UBTFP17480 764 aaKnown RBP14.75□□□□□ -0.05
MYD88-210ENST00000484513 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
MYD88-210ENST00000484513 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
MYD88-210ENST00000484513 CUX2O14529 1486 aa14.71□□□□□ -0.05
MYD88-210ENST00000484513 TDRD9Q8NDG6 1382 aaKnown RBP14.71□□□□□ -0.06
MYD88-210ENST00000484513 POLA1P09884 1462 aaPredicted RBP14.7□□□□□ -0.06
MYD88-210ENST00000484513 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
MYD88-210ENST00000484513 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
MYD88-210ENST00000484513 BIVM-ERCC5R4GMW8 1640 aa14.68□□□□□ -0.06
MYD88-210ENST00000484513 KIF27Q86VH2 1401 aa14.67□□□□□ -0.06
MYD88-210ENST00000484513 EEA1Q15075 1411 aa14.62□□□□□ -0.07
MYD88-210ENST00000484513 IGF1RP08069 1367 aa14.59□□□□□ -0.07
MYD88-210ENST00000484513 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.071e-6■■■■■ 35.7
MYD88-210ENST00000484513 RAPGEF2Q9Y4G8 1499 aa14.55□□□□□ -0.08
MYD88-210ENST00000484513 FBLN2P98095 1184 aa14.55□□□□□ -0.08
MYD88-210ENST00000484513 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
MYD88-210ENST00000484513 ZNF608Q9ULD9 1512 aaPredicted RBP14.54□□□□□ -0.08
MYD88-210ENST00000484513 CARMIL1Q5VZK9 1371 aa14.53□□□□□ -0.08
MYD88-210ENST00000484513 WDR62O43379 1518 aa14.53□□□□□ -0.08
MYD88-210ENST00000484513 GAPVD1Q14C86 1478 aa14.51□□□□□ -0.09
MYD88-210ENST00000484513 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
MYD88-210ENST00000484513 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
MYD88-210ENST00000484513 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
MYD88-210ENST00000484513 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
MYD88-210ENST00000484513 PRXQ9BXM0 1461 aa14.46□□□□□ -0.09
MYD88-210ENST00000484513 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
MYD88-210ENST00000484513 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
MYD88-210ENST00000484513 TTBK1Q5TCY1 1321 aaPredicted RBP14.44□□□□□ -0.1
MYD88-210ENST00000484513 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
MYD88-210ENST00000484513 CEP162Q5TB80 1403 aa14.43□□□□□ -0.1
MYD88-210ENST00000484513 CHMP7Q8WUX9 453 aaPredicted RBP14.42□□□□□ -0.1
MYD88-210ENST00000484513 KIF21BO75037 1637 aa14.38□□□□□ -0.11
MYD88-210ENST00000484513 GRIN2BQ13224 1484 aa14.38□□□□□ -0.11
MYD88-210ENST00000484513 CLIP1P30622 1438 aa14.36□□□□□ -0.11
MYD88-210ENST00000484513 ABCA5Q8WWZ7 1642 aa14.35□□□□□ -0.11
MYD88-210ENST00000484513 SNAPC4Q5SXM2 1469 aa14.35□□□□□ -0.11
MYD88-210ENST00000484513 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
MYD88-210ENST00000484513 ATP1B4Q9UN42 357 aaPredicted RBP14.34□□□□□ -0.11
MYD88-210ENST00000484513 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.12
MYD88-210ENST00000484513 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
MYD88-210ENST00000484513 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
MYD88-210ENST00000484513 CUL7Q14999 1698 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms