RNA–Protein interactions for RNA: ENST00000416282.2

MYD88-202, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

TSL 1 (best)

Gene MYD88, Length 2,730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-202ENST00000416282 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
MYD88-202ENST00000416282 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
MYD88-202ENST00000416282 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
MYD88-202ENST00000416282 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
MYD88-202ENST00000416282 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
MYD88-202ENST00000416282 HRCP23327 699 aa24.45■■□□□ 1.5
MYD88-202ENST00000416282 CHIC1Q5VXU3 224 aa24.4■■□□□ 1.5
MYD88-202ENST00000416282 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
MYD88-202ENST00000416282 DCAF1Q9Y4B6 1507 aa24.21■■□□□ 1.47
MYD88-202ENST00000416282 PCGF6Q9BYE7 350 aa23.97■■□□□ 1.43
MYD88-202ENST00000416282 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
MYD88-202ENST00000416282 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
MYD88-202ENST00000416282 TRIM26Q12899 539 aaPredicted RBP23.6■■□□□ 1.37
MYD88-202ENST00000416282 ABCC9O60706 1549 aa23.58■■□□□ 1.37
MYD88-202ENST00000416282 LOC105371045A0A1W2PR82 267 aa23.54■■□□□ 1.36
MYD88-202ENST00000416282 ZEB1P37275 1124 aaPredicted RBP23.39■■□□□ 1.33
MYD88-202ENST00000416282 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
MYD88-202ENST00000416282 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.31
MYD88-202ENST00000416282 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
MYD88-202ENST00000416282 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
MYD88-202ENST00000416282 PELP1Q8IZL8 1130 aaKnown RBP23.06■■□□□ 1.28
MYD88-202ENST00000416282 NACADO15069 1562 aa22.81■■□□□ 1.24
MYD88-202ENST00000416282 FAM9AQ8IZU1 332 aaPredicted RBP22.73■■□□□ 1.23
MYD88-202ENST00000416282 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
MYD88-202ENST00000416282 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
MYD88-202ENST00000416282 CECR2Q9BXF3 1484 aa22.69■■□□□ 1.22
MYD88-202ENST00000416282 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
MYD88-202ENST00000416282 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
MYD88-202ENST00000416282 WIZO95785 1651 aa22.61■■□□□ 1.21
MYD88-202ENST00000416282 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
MYD88-202ENST00000416282 ACIN1Q9UKV3 1341 aaKnown RBP22.43■■□□□ 1.18
MYD88-202ENST00000416282 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
MYD88-202ENST00000416282 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
MYD88-202ENST00000416282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
MYD88-202ENST00000416282 EHMT2Q96KQ7 1210 aa22.37■■□□□ 1.17
MYD88-202ENST00000416282 EEA1Q15075 1411 aa22.29■■□□□ 1.16
MYD88-202ENST00000416282 TNIKQ9UKE5 1360 aa22.28■■□□□ 1.16
MYD88-202ENST00000416282 CENPBP07199 599 aaPredicted RBP22.27■■□□□ 1.16
MYD88-202ENST00000416282 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
MYD88-202ENST00000416282 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
MYD88-202ENST00000416282 NEUROD1Q13562 356 aa22.26■■□□□ 1.15
MYD88-202ENST00000416282 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
MYD88-202ENST00000416282 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
MYD88-202ENST00000416282 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
MYD88-202ENST00000416282 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
MYD88-202ENST00000416282 MYT1Q01538 1121 aa22.11■■□□□ 1.13
MYD88-202ENST00000416282 SOGA1O94964 1423 aa22.09■■□□□ 1.13
MYD88-202ENST00000416282 GTF3C3Q9Y5Q9 886 aa22.08■■□□□ 1.13
MYD88-202ENST00000416282 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
MYD88-202ENST00000416282 GOLGA3Q08378 1498 aa22.05■■□□□ 1.12
MYD88-202ENST00000416282 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
MYD88-202ENST00000416282 KIF21BO75037 1637 aa21.94■■□□□ 1.1
MYD88-202ENST00000416282 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
MYD88-202ENST00000416282 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
MYD88-202ENST00000416282 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
MYD88-202ENST00000416282 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.1
MYD88-202ENST00000416282 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
MYD88-202ENST00000416282 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
MYD88-202ENST00000416282 TTBK1Q5TCY1 1321 aaPredicted RBP21.81■■□□□ 1.08
MYD88-202ENST00000416282 VPS8Q8N3P4 1428 aa21.78■■□□□ 1.08
MYD88-202ENST00000416282 CLIP1P30622 1438 aa21.75■■□□□ 1.07
MYD88-202ENST00000416282 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
MYD88-202ENST00000416282 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
MYD88-202ENST00000416282 MIER1Q8N108 512 aa21.68■■□□□ 1.06
MYD88-202ENST00000416282 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
MYD88-202ENST00000416282 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
MYD88-202ENST00000416282 APLP2Q06481 763 aa21.57■■□□□ 1.04
MYD88-202ENST00000416282 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
MYD88-202ENST00000416282 RAPGEF2Q9Y4G8 1499 aa21.57■■□□□ 1.04
MYD88-202ENST00000416282 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
MYD88-202ENST00000416282 ERICH3Q5RHP9 1530 aa21.52■■□□□ 1.04
MYD88-202ENST00000416282 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
MYD88-202ENST00000416282 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
MYD88-202ENST00000416282 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.03
MYD88-202ENST00000416282 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
MYD88-202ENST00000416282 CUX2O14529 1486 aa21.41■■□□□ 1.02
MYD88-202ENST00000416282 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
MYD88-202ENST00000416282 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
MYD88-202ENST00000416282 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.01
MYD88-202ENST00000416282 SUPT16HQ9Y5B9 1047 aaKnown RBP21.24■□□□□ 0.99
MYD88-202ENST00000416282 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
MYD88-202ENST00000416282 CCNB3Q8WWL7 1395 aa21.19■□□□□ 0.98
MYD88-202ENST00000416282 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
MYD88-202ENST00000416282 MAP3K1Q13233 1512 aa21.16■□□□□ 0.98
MYD88-202ENST00000416282 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
MYD88-202ENST00000416282 CUX1P39880 1505 aa21.14■□□□□ 0.97
MYD88-202ENST00000416282 ARHGAP35Q9NRY4 1499 aa21.12■□□□□ 0.97
MYD88-202ENST00000416282 RANGAP1P46060 587 aaPredicted RBP21.11■□□□□ 0.97
MYD88-202ENST00000416282 NCAPD3P42695 1498 aa21.08■□□□□ 0.96
MYD88-202ENST00000416282 MAPKBP1O60336 1514 aa21.06■□□□□ 0.96
MYD88-202ENST00000416282 CFTRP13569 1480 aa21.02■□□□□ 0.95
MYD88-202ENST00000416282 TIAM1Q13009 1591 aa21.01■□□□□ 0.95
MYD88-202ENST00000416282 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
MYD88-202ENST00000416282 TSHZ2Q9NRE2 1034 aa21■□□□□ 0.95
MYD88-202ENST00000416282 TIMELESSQ9UNS1 1208 aa20.97■□□□□ 0.95
MYD88-202ENST00000416282 SETD5Q9C0A6 1442 aa20.97■□□□□ 0.95
MYD88-202ENST00000416282 PRDM2Q13029 1718 aa20.95■□□□□ 0.94
MYD88-202ENST00000416282 LRRC9Q6ZRR7 1453 aa20.92■□□□□ 0.94
MYD88-202ENST00000416282 IGF1RP08069 1367 aa20.88■□□□□ 0.93
MYD88-202ENST00000416282 CFAP43Q8NDM7 1665 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms