RNA–Protein interactions for RNA: ENST00000565325.5

NPTN-209, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-209ENST00000565325 NISCHQ9Y2I1 1504 aa36.2■■■■□ 3.39
NPTN-209ENST00000565325 ABCC9O60706 1549 aa33.18■■■□□ 2.9
NPTN-209ENST00000565325 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
NPTN-209ENST00000565325 DNAJC5BQ9UF47 199 aa31.52■■■□□ 2.64
NPTN-209ENST00000565325 RB1CC1Q8TDY2 1594 aa31.42■■■□□ 2.62
NPTN-209ENST00000565325 NACADO15069 1562 aa31.07■■■□□ 2.56
NPTN-209ENST00000565325 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.52
NPTN-209ENST00000565325 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
NPTN-209ENST00000565325 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
NPTN-209ENST00000565325 BICRAQ9NZM4 1560 aa30.49■■■□□ 2.47
NPTN-209ENST00000565325 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
NPTN-209ENST00000565325 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
NPTN-209ENST00000565325 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
NPTN-209ENST00000565325 CECR2Q9BXF3 1484 aa29.95■■■□□ 2.39
NPTN-209ENST00000565325 ZCCHC6Q5VYS8 1495 aaKnown RBP29.89■■■□□ 2.38
NPTN-209ENST00000565325 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.38
NPTN-209ENST00000565325 SCRIBQ14160 1630 aa29.8■■■□□ 2.36
NPTN-209ENST00000565325 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
NPTN-209ENST00000565325 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
NPTN-209ENST00000565325 CUX2O14529 1486 aa28.84■■■□□ 2.21
NPTN-209ENST00000565325 ERCC6Q03468 1493 aa28.72■■■□□ 2.19
NPTN-209ENST00000565325 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
NPTN-209ENST00000565325 ATAD2BQ9ULI0 1458 aa28.49■■■□□ 2.15
NPTN-209ENST00000565325 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
NPTN-209ENST00000565325 SMARCA2P51531 1590 aa28.43■■■□□ 2.14
NPTN-209ENST00000565325 SMARCA4P51532 1647 aa28.38■■■□□ 2.13
NPTN-209ENST00000565325 NESP48681 1621 aa28.36■■■□□ 2.13
NPTN-209ENST00000565325 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
NPTN-209ENST00000565325 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
NPTN-209ENST00000565325 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
NPTN-209ENST00000565325 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
NPTN-209ENST00000565325 PEG3Q9GZU2 1588 aa28.1■■■□□ 2.09
NPTN-209ENST00000565325 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
NPTN-209ENST00000565325 PDS5BQ9NTI5 1447 aa27.95■■■□□ 2.07
NPTN-209ENST00000565325 MROH2BQ7Z745 1585 aa27.88■■■□□ 2.05
NPTN-209ENST00000565325 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
NPTN-209ENST00000565325 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
NPTN-209ENST00000565325 CADPSQ9ULU8 1353 aa27.74■■■□□ 2.03
NPTN-209ENST00000565325 WDR62O43379 1518 aa27.71■■■□□ 2.03
NPTN-209ENST00000565325 WIZO95785 1651 aa27.56■■■□□ 2
NPTN-209ENST00000565325 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
NPTN-209ENST00000565325 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
NPTN-209ENST00000565325 OSCARQ8IYS5 282 aa27.39■■□□□ 1.98
NPTN-209ENST00000565325 CFTRP13569 1480 aa27.34■■□□□ 1.97
NPTN-209ENST00000565325 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
NPTN-209ENST00000565325 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
NPTN-209ENST00000565325 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
NPTN-209ENST00000565325 RIMBP3CA6NJZ7 1639 aa27.16■■□□□ 1.94
NPTN-209ENST00000565325 RIMBP3BA6NNM3 1639 aa27.16■■□□□ 1.94
NPTN-209ENST00000565325 RIMBP3Q9UFD9 1639 aa27.16■■□□□ 1.94
NPTN-209ENST00000565325 RSF1Q96T23 1441 aaPredicted RBP27.1■■□□□ 1.93
NPTN-209ENST00000565325 IFT140Q96RY7 1462 aa27■■□□□ 1.91
NPTN-209ENST00000565325 ARHGEF11O15085 1522 aa27■■□□□ 1.91
NPTN-209ENST00000565325 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
NPTN-209ENST00000565325 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
NPTN-209ENST00000565325 EIF4G3O43432 1585 aaKnown RBP26.87■■□□□ 1.89
NPTN-209ENST00000565325 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.89
NPTN-209ENST00000565325 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
NPTN-209ENST00000565325 CHD1O14646 1710 aa26.81■■□□□ 1.88
NPTN-209ENST00000565325 CYB5RLQ6IPT4 315 aa26.79■■□□□ 1.88
NPTN-209ENST00000565325 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
NPTN-209ENST00000565325 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
NPTN-209ENST00000565325 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
NPTN-209ENST00000565325 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.862e-6■■■□□ 15.8
NPTN-209ENST00000565325 TRHP20396 242 aaPredicted RBP26.67■■□□□ 1.86
NPTN-209ENST00000565325 FBLN2P98095 1184 aa26.61■■□□□ 1.85
NPTN-209ENST00000565325 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
NPTN-209ENST00000565325 RAD54L2Q9Y4B4 1467 aa26.47■■□□□ 1.83
NPTN-209ENST00000565325 SOGA1O94964 1423 aa26.43■■□□□ 1.82
NPTN-209ENST00000565325 CLASP1Q7Z460 1538 aa26.43■■□□□ 1.82
NPTN-209ENST00000565325 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
NPTN-209ENST00000565325 WDR97A6NE52 1622 aa26.43■■□□□ 1.82
NPTN-209ENST00000565325 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
NPTN-209ENST00000565325 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
NPTN-209ENST00000565325 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
NPTN-209ENST00000565325 CHMP7Q8WUX9 453 aaPredicted RBP26.33■■□□□ 1.81
NPTN-209ENST00000565325 FGD5Q6ZNL6 1462 aa26.33■■□□□ 1.81
NPTN-209ENST00000565325 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
NPTN-209ENST00000565325 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
NPTN-209ENST00000565325 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
NPTN-209ENST00000565325 CUX1P39880 1505 aa26.24■■□□□ 1.79
NPTN-209ENST00000565325 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
NPTN-209ENST00000565325 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
NPTN-209ENST00000565325 ABCA5Q8WWZ7 1642 aa26.05■■□□□ 1.76
NPTN-209ENST00000565325 ABCA10Q8WWZ4 1543 aa26.01■■□□□ 1.75
NPTN-209ENST00000565325 ERCC6L2Q5T890 1561 aa25.96■■□□□ 1.75
NPTN-209ENST00000565325 GRIN2AQ12879 1464 aa25.94■■□□□ 1.74
NPTN-209ENST00000565325 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
NPTN-209ENST00000565325 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
NPTN-209ENST00000565325 NUP160Q12769 1436 aa25.86■■□□□ 1.73
NPTN-209ENST00000565325 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
NPTN-209ENST00000565325 KIF13AQ9H1H9 1805 aa25.83■■□□□ 1.73
NPTN-209ENST00000565325 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
NPTN-209ENST00000565325 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
NPTN-209ENST00000565325 BIVM-ERCC5R4GMW8 1640 aa25.73■■□□□ 1.71
NPTN-209ENST00000565325 TOP2BQ02880 1626 aa25.7■■□□□ 1.71
NPTN-209ENST00000565325 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
NPTN-209ENST00000565325 PRG4Q92954 1404 aaPredicted RBP25.65■■□□□ 1.7
NPTN-209ENST00000565325 JPH4Q96JJ6 628 aa25.57■■□□□ 1.68
NPTN-209ENST00000565325 ABCC10Q5T3U5 1492 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms