RNA–Protein interactions for RNA: ENST00000351217.10

NPTN-202, Transcript of neuroplastin, humanhuman

TSL 1 (best) BASIC

Gene NPTN, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-202ENST00000351217 NISCHQ9Y2I1 1504 aa37.02■■■■□ 3.52
NPTN-202ENST00000351217 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
NPTN-202ENST00000351217 SHROOM4Q9ULL8 1493 aa31.45■■■□□ 2.63
NPTN-202ENST00000351217 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
NPTN-202ENST00000351217 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
NPTN-202ENST00000351217 SUPT5HO00267 1087 aaKnown RBP30.7■■■□□ 2.51
NPTN-202ENST00000351217 DCAF1Q9Y4B6 1507 aa30.33■■■□□ 2.45
NPTN-202ENST00000351217 ABCC9O60706 1549 aa29.67■■■□□ 2.34
NPTN-202ENST00000351217 SCRIBQ14160 1630 aa29.64■■■□□ 2.34
NPTN-202ENST00000351217 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
NPTN-202ENST00000351217 MYO15BQ96JP2 1530 aa29.56■■■□□ 2.32
NPTN-202ENST00000351217 NACADO15069 1562 aa29.32■■■□□ 2.28
NPTN-202ENST00000351217 RSF1Q96T23 1441 aaPredicted RBP29.19■■■□□ 2.26
NPTN-202ENST00000351217 CECR2Q9BXF3 1484 aa28.94■■■□□ 2.22
NPTN-202ENST00000351217 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
NPTN-202ENST00000351217 MROH2BQ7Z745 1585 aa28.79■■■□□ 2.2
NPTN-202ENST00000351217 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
NPTN-202ENST00000351217 WIZO95785 1651 aa28.62■■■□□ 2.17
NPTN-202ENST00000351217 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
NPTN-202ENST00000351217 UNC13AQ9UPW8 1703 aa28.48■■■□□ 2.15
NPTN-202ENST00000351217 BAZ1AQ9NRL2 1556 aaPredicted RBP28.47■■■□□ 2.15
NPTN-202ENST00000351217 PCGF6Q9BYE7 350 aa28.41■■■□□ 2.14
NPTN-202ENST00000351217 FAM9AQ8IZU1 332 aaPredicted RBP28.4■■■□□ 2.14
NPTN-202ENST00000351217 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
NPTN-202ENST00000351217 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
NPTN-202ENST00000351217 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
NPTN-202ENST00000351217 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
NPTN-202ENST00000351217 BICRAQ9NZM4 1560 aa28.13■■■□□ 2.09
NPTN-202ENST00000351217 HRCP23327 699 aa28.09■■■□□ 2.09
NPTN-202ENST00000351217 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
NPTN-202ENST00000351217 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
NPTN-202ENST00000351217 SMARCA2P51531 1590 aa27.98■■■□□ 2.07
NPTN-202ENST00000351217 TRIM26Q12899 539 aaPredicted RBP27.9■■■□□ 2.06
NPTN-202ENST00000351217 ABCC8Q09428 1581 aa27.89■■■□□ 2.05
NPTN-202ENST00000351217 PEG3Q9GZU2 1588 aa27.69■■■□□ 2.02
NPTN-202ENST00000351217 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.02
NPTN-202ENST00000351217 PPARGC1BQ86YN6 1023 aaKnown RBP27.63■■■□□ 2.01
NPTN-202ENST00000351217 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
NPTN-202ENST00000351217 SOGA1O94964 1423 aa27.56■■■□□ 2
NPTN-202ENST00000351217 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
NPTN-202ENST00000351217 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
NPTN-202ENST00000351217 CSRNP3Q8WYN3 585 aa27.4■■□□□ 1.98
NPTN-202ENST00000351217 UBTFP17480 764 aaKnown RBP27.33■■□□□ 1.97
NPTN-202ENST00000351217 EEA1Q15075 1411 aa27.31■■□□□ 1.96
NPTN-202ENST00000351217 SYNJ1O43426 1573 aa27.3■■□□□ 1.96
NPTN-202ENST00000351217 CEP162Q5TB80 1403 aa27.27■■□□□ 1.96
NPTN-202ENST00000351217 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
NPTN-202ENST00000351217 TTBK1Q5TCY1 1321 aaPredicted RBP27.21■■□□□ 1.95
NPTN-202ENST00000351217 NCAPD3P42695 1498 aa27.15■■□□□ 1.94
NPTN-202ENST00000351217 GOLGA3Q08378 1498 aa27.14■■□□□ 1.94
NPTN-202ENST00000351217 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
NPTN-202ENST00000351217 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
NPTN-202ENST00000351217 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
NPTN-202ENST00000351217 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
NPTN-202ENST00000351217 KIF21BO75037 1637 aa26.94■■□□□ 1.9
NPTN-202ENST00000351217 RANGAP1P46060 587 aaPredicted RBP26.93■■□□□ 1.9
NPTN-202ENST00000351217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
NPTN-202ENST00000351217 RAPGEF2Q9Y4G8 1499 aa26.9■■□□□ 1.9
NPTN-202ENST00000351217 BIVM-ERCC5R4GMW8 1640 aa26.86■■□□□ 1.89
NPTN-202ENST00000351217 CLIP1P30622 1438 aa26.85■■□□□ 1.89
NPTN-202ENST00000351217 CFTRP13569 1480 aa26.84■■□□□ 1.89
NPTN-202ENST00000351217 CCER1Q8TC90 406 aaPredicted RBP26.82■■□□□ 1.88
NPTN-202ENST00000351217 CUX1P39880 1505 aa26.81■■□□□ 1.88
NPTN-202ENST00000351217 CC2D2AQ9P2K1 1620 aa26.67■■□□□ 1.86
NPTN-202ENST00000351217 VPS8Q8N3P4 1428 aa26.66■■□□□ 1.86
NPTN-202ENST00000351217 KIF27Q86VH2 1401 aa26.64■■□□□ 1.86
NPTN-202ENST00000351217 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
NPTN-202ENST00000351217 APLP2Q06481 763 aa26.64■■□□□ 1.86
NPTN-202ENST00000351217 PRXQ9BXM0 1461 aa26.63■■□□□ 1.85
NPTN-202ENST00000351217 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.84
NPTN-202ENST00000351217 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
NPTN-202ENST00000351217 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
NPTN-202ENST00000351217 CUX2O14529 1486 aa26.47■■□□□ 1.83
NPTN-202ENST00000351217 FGD5Q6ZNL6 1462 aa26.42■■□□□ 1.82
NPTN-202ENST00000351217 PELP1Q8IZL8 1130 aaKnown RBP26.41■■□□□ 1.82
NPTN-202ENST00000351217 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
NPTN-202ENST00000351217 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
NPTN-202ENST00000351217 IGF1RP08069 1367 aa26.37■■□□□ 1.81
NPTN-202ENST00000351217 NESP48681 1621 aa26.33■■□□□ 1.81
NPTN-202ENST00000351217 KANK4Q5T7N3 995 aaPredicted RBP26.29■■□□□ 1.8
NPTN-202ENST00000351217 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
NPTN-202ENST00000351217 ARHGAP35Q9NRY4 1499 aa26.26■■□□□ 1.79
NPTN-202ENST00000351217 RAD54L2Q9Y4B4 1467 aa26.21■■□□□ 1.79
NPTN-202ENST00000351217 DNMBPQ6XZF7 1577 aa26.17■■□□□ 1.78
NPTN-202ENST00000351217 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
NPTN-202ENST00000351217 TOPBP1Q92547 1522 aa26.16■■□□□ 1.78
NPTN-202ENST00000351217 SCAF1Q9H7N4 1312 aaKnown RBP26.16■■□□□ 1.78
NPTN-202ENST00000351217 POLA1P09884 1462 aaPredicted RBP26.14■■□□□ 1.78
NPTN-202ENST00000351217 P3H3Q8IVL6 736 aa26.08■■□□□ 1.77
NPTN-202ENST00000351217 DIEXFQ68CQ4 756 aaKnown RBP26.06■■□□□ 1.76
NPTN-202ENST00000351217 ABCA10Q8WWZ4 1543 aa26.06■■□□□ 1.76
NPTN-202ENST00000351217 LAMC3Q9Y6N6 1575 aa26.04■■□□□ 1.76
NPTN-202ENST00000351217 URB2Q14146 1524 aaKnown RBP26■■□□□ 1.75
NPTN-202ENST00000351217 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
NPTN-202ENST00000351217 ITGAEP38570 1179 aa25.98■■□□□ 1.75
NPTN-202ENST00000351217 RRBP1Q9P2E9 1410 aaKnown RBP25.96■■□□□ 1.75
NPTN-202ENST00000351217 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
NPTN-202ENST00000351217 ZNF316A6NFI3 1004 aaPredicted RBP25.94■■□□□ 1.74
NPTN-202ENST00000351217 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
NPTN-202ENST00000351217 CCNB3Q8WWL7 1395 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms