Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.072e-12■□□□□ 8.3
LARP4Q71RC2 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.55□□□□□ -0.42e-12■□□□□ 8.3
LARP4Q71RC2 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC9.4□□□□□ -0.92e-12■□□□□ 8.3
LARP4Q71RC2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.362e-12■□□□□ 8.3
LARP4Q71RC2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.55□□□□□ -1.362e-12■□□□□ 8.3
LARP4Q71RC2 RPS8-208ENST00000497035 694 ntTSL 313.91□□□□□ -0.184e-51■□□□□ 8.3
LARP4Q71RC2 RPS8-204ENST00000470475 981 ntTSL 213.38□□□□□ -0.274e-51■□□□□ 8.3
LARP4Q71RC2 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.744e-51■□□□□ 8.3
LARP4Q71RC2 RPS8-201ENST00000372209 685 ntTSL 2 BASIC9.72□□□□□ -0.854e-51■□□□□ 8.3
LARP4Q71RC2 RALY-205ENST00000442805 871 ntTSL 523■■□□□ 1.274e-16■□□□□ 8.3
LARP4Q71RC2 PSMD3-202ENST00000415039 1598 ntTSL 221.52■■□□□ 1.041e-8■□□□□ 8.3
LARP4Q71RC2 RALY-202ENST00000333552 786 ntTSL 320.35■□□□□ 0.854e-16■□□□□ 8.3
LARP4Q71RC2 FKBP10-204ENST00000464180 1129 ntTSL 218.74■□□□□ 0.591e-8■□□□□ 8.3
LARP4Q71RC2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.011e-8■□□□□ 8.3
LARP4Q71RC2 SEPT9-224ENST00000589246 594 ntTSL 214.57□□□□□ -0.088e-57■□□□□ 8.3
LARP4Q71RC2 ACTN4-205ENST00000477174 544 ntTSL 312.31□□□□□ -0.442e-23■□□□□ 8.3
LARP4Q71RC2 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.1□□□□□ -0.478e-57■□□□□ 8.3
LARP4Q71RC2 HEXA-214ENST00000569116 449 ntTSL 212.01□□□□□ -0.491e-8■□□□□ 8.3
LARP4Q71RC2 NRIP1-205ENST00000637630 573 ntTSL 311.23□□□□□ -0.611e-8■□□□□ 8.3
LARP4Q71RC2 NRIP1-207ENST00000638122 543 ntTSL 1 (best)11□□□□□ -0.651e-8■□□□□ 8.3
LARP4Q71RC2 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.741e-8■□□□□ 8.3
LARP4Q71RC2 NRIP1-206ENST00000637963 498 ntTSL 49.28□□□□□ -0.921e-8■□□□□ 8.3
LARP4Q71RC2 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.211e-8■□□□□ 8.3
LARP4Q71RC2 EEF1B2-211ENST00000482103 587 ntTSL 26.93□□□□□ -1.31e-8■□□□□ 8.3
LARP4Q71RC2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.45□□□□□ -1.381e-8■□□□□ 8.3
LARP4Q71RC2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.41e-8■□□□□ 8.3
LARP4Q71RC2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.471e-8■□□□□ 8.3
LARP4Q71RC2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.751e-8■□□□□ 8.3
LARP4Q71RC2 ITPA-204ENST00000460550 967 ntTSL 215.37■□□□□ 0.057e-7■□□□□ 8.3
LARP4Q71RC2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.04■□□□□ -07e-7■□□□□ 8.3
LARP4Q71RC2 ITPA-208ENST00000483354 1028 ntTSL 315.04■□□□□ -07e-7■□□□□ 8.3
LARP4Q71RC2 ITPA-209ENST00000490838 977 ntTSL 214.61□□□□□ -0.077e-7■□□□□ 8.3
LARP4Q71RC2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.177e-7■□□□□ 8.3
LARP4Q71RC2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.97□□□□□ -0.177e-7■□□□□ 8.3
LARP4Q71RC2 ITPA-207ENST00000472295 670 ntTSL 213.97□□□□□ -0.177e-7■□□□□ 8.3
LARP4Q71RC2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.05■□□□□ 0.643e-7■□□□□ 8.3
LARP4Q71RC2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.073e-7■□□□□ 8.3
LARP4Q71RC2 CCDC57-215ENST00000582100 637 ntTSL 313.97□□□□□ -0.173e-7■□□□□ 8.3
LARP4Q71RC2 SRSF11-204ENST00000395136 1408 ntTSL 1 (best)24.07■■□□□ 1.441e-21■□□□□ 8.3
LARP4Q71RC2 RPL6-212ENST00000553205 899 ntTSL 26.7□□□□□ -1.342e-11■□□□□ 8.3
LARP4Q71RC2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.98□□□□□ -0.171e-323■□□□□ 8.3
LARP4Q71RC2 SLC22A31-205ENST00000603735 791 ntTSL 316.27■□□□□ 0.27e-7■□□□□ 8.3
LARP4Q71RC2 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC10.98□□□□□ -0.654e-38■□□□□ 8.3
LARP4Q71RC2 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC10.43□□□□□ -0.744e-38■□□□□ 8.3
LARP4Q71RC2 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC9.2□□□□□ -0.944e-38■□□□□ 8.3
LARP4Q71RC2 NAP1L1-211ENST00000547969 543 ntTSL 46.04□□□□□ -1.444e-38■□□□□ 8.3
LARP4Q71RC2 NAP1L1-212ENST00000547993 2481 ntTSL 1 (best)5.91□□□□□ -1.464e-38■□□□□ 8.3
LARP4Q71RC2 NAP1L1-208ENST00000547529 892 ntTSL 55.68□□□□□ -1.54e-38■□□□□ 8.3
LARP4Q71RC2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.72□□□□□ -1.654e-38■□□□□ 8.3
LARP4Q71RC2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.77□□□□□ -0.043e-20■□□□□ 8.3
LARP4Q71RC2 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.413e-20■□□□□ 8.3
LARP4Q71RC2 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.413e-20■□□□□ 8.3
LARP4Q71RC2 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.753e-20■□□□□ 8.3
LARP4Q71RC2 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.753e-20■□□□□ 8.3
LARP4Q71RC2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.289e-9■□□□□ 8.2
LARP4Q71RC2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.38■□□□□ 0.859e-10■□□□□ 8.2
LARP4Q71RC2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.789e-10■□□□□ 8.2
LARP4Q71RC2 CFL1-205ENST00000526975 567 ntTSL 317.09■□□□□ 0.335e-27■□□□□ 8.2
LARP4Q71RC2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.56■□□□□ 0.249e-10■□□□□ 8.2
LARP4Q71RC2 TPM1-228ENST00000560975 2855 ntTSL 516.53■□□□□ 0.249e-10■□□□□ 8.2
LARP4Q71RC2 TPM1-214ENST00000558544 1399 ntTSL 516.33■□□□□ 0.29e-10■□□□□ 8.2
LARP4Q71RC2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16■□□□□ 0.159e-10■□□□□ 8.2
LARP4Q71RC2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16■□□□□ 0.159e-10■□□□□ 8.2
LARP4Q71RC2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.19e-10■□□□□ 8.2
LARP4Q71RC2 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.49e-10■□□□□ 8.2
LARP4Q71RC2 TPM1-209ENST00000558072 525 ntTSL 211.86□□□□□ -0.519e-10■□□□□ 8.2
LARP4Q71RC2 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.649e-10■□□□□ 8.2
LARP4Q71RC2 TPM1-210ENST00000558264 2687 ntTSL 210.47□□□□□ -0.739e-10■□□□□ 8.2
LARP4Q71RC2 IDH1-203ENST00000415913 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.839e-10■□□□□ 8.2
LARP4Q71RC2 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.839e-10■□□□□ 8.2
LARP4Q71RC2 TPM1-212ENST00000558347 1525 ntTSL 59.87□□□□□ -0.839e-10■□□□□ 8.2
LARP4Q71RC2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.134e-17■□□□□ 8.2
LARP4Q71RC2 NDRG1-217ENST00000521414 2349 ntTSL 214.16□□□□□ -0.144e-17■□□□□ 8.2
LARP4Q71RC2 NDRG1-216ENST00000521026 2145 ntTSL 214.08□□□□□ -0.164e-17■□□□□ 8.2
LARP4Q71RC2 NDRG1-204ENST00000517599 2918 ntTSL 212.07□□□□□ -0.484e-17■□□□□ 8.2
LARP4Q71RC2 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC11.36□□□□□ -0.594e-17■□□□□ 8.2
LARP4Q71RC2 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.684e-17■□□□□ 8.2
LARP4Q71RC2 NDRG1-218ENST00000521438 2810 ntTSL 29.84□□□□□ -0.834e-17■□□□□ 8.2
LARP4Q71RC2 NDRG1-212ENST00000519278 3983 ntTSL 29.57□□□□□ -0.884e-17■□□□□ 8.2
LARP4Q71RC2 RACK1-205ENST00000502905 643 ntTSL 39.65□□□□□ -0.865e-28■□□□□ 8.2
LARP4Q71RC2 RACK1-233ENST00000514455 791 ntTSL 2 BASIC9.31□□□□□ -0.925e-28■□□□□ 8.2
LARP4Q71RC2 RACK1-221ENST00000509148 888 ntTSL 29.09□□□□□ -0.955e-28■□□□□ 8.2
LARP4Q71RC2 RACK1-217ENST00000507756 889 ntTSL 58.28□□□□□ -1.085e-28■□□□□ 8.2
LARP4Q71RC2 RACK1-222ENST00000509535 456 ntTSL 37.88□□□□□ -1.155e-28■□□□□ 8.2
LARP4Q71RC2 RACK1-209ENST00000504128 990 ntTSL 27.61□□□□□ -1.195e-28■□□□□ 8.2
LARP4Q71RC2 RACK1-216ENST00000507273 358 ntTSL 27.61□□□□□ -1.195e-28■□□□□ 8.2
LARP4Q71RC2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.752e-6■□□□□ 8.2
LARP4Q71RC2 MMP11-204ENST00000437086 2071 ntTSL 219.03■□□□□ 0.642e-6■□□□□ 8.2
LARP4Q71RC2 MMP11-206ENST00000465385 3823 ntTSL 213.52□□□□□ -0.252e-6■□□□□ 8.2
LARP4Q71RC2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.131e-6■□□□□ 8.2
LARP4Q71RC2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.921e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-206ENST00000568224 1721 ntTSL 1 (best)20.81■□□□□ 0.921e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.911e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-209ENST00000561689 1957 ntTSL 220.7■□□□□ 0.91e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-230ENST00000568076 1968 ntTSL 520.17■□□□□ 0.821e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.05■□□□□ 0.81e-6■□□□□ 8.2
LARP4Q71RC2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.82■□□□□ 0.761e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-250ENST00000636839 2018 ntTSL 519.48■□□□□ 0.711e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.651e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.08■□□□□ 0.651e-6■□□□□ 8.2
Retrieved 100 of 15,922 protein–RNA pairs in 186.3 ms