RNA–Protein interactions for RNA: ENST00000537882.2

NDRG1-229, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2 BASIC

Gene NDRG1, Length 2,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-229ENST00000537882 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
NDRG1-229ENST00000537882 HRCP23327 699 aa19.31■□□□□ 0.68
NDRG1-229ENST00000537882 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
NDRG1-229ENST00000537882 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
NDRG1-229ENST00000537882 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
NDRG1-229ENST00000537882 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.58
NDRG1-229ENST00000537882 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
NDRG1-229ENST00000537882 SHROOM4Q9ULL8 1493 aa18.59■□□□□ 0.57
NDRG1-229ENST00000537882 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
NDRG1-229ENST00000537882 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
NDRG1-229ENST00000537882 MYT1Q01538 1121 aa18.31■□□□□ 0.52
NDRG1-229ENST00000537882 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
NDRG1-229ENST00000537882 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
NDRG1-229ENST00000537882 TRIM26Q12899 539 aaPredicted RBP18.2■□□□□ 0.5
NDRG1-229ENST00000537882 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
NDRG1-229ENST00000537882 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
NDRG1-229ENST00000537882 LOC105371045A0A1W2PR82 267 aa17.97■□□□□ 0.47
NDRG1-229ENST00000537882 ACIN1Q9UKV3 1341 aaKnown RBP17.84■□□□□ 0.45
NDRG1-229ENST00000537882 NEUROD1Q13562 356 aa17.72■□□□□ 0.43
NDRG1-229ENST00000537882 GTF3C3Q9Y5Q9 886 aa17.62■□□□□ 0.41
NDRG1-229ENST00000537882 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
NDRG1-229ENST00000537882 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
NDRG1-229ENST00000537882 DIEXFQ68CQ4 756 aaKnown RBP17.42■□□□□ 0.38
NDRG1-229ENST00000537882 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
NDRG1-229ENST00000537882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
NDRG1-229ENST00000537882 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.36
NDRG1-229ENST00000537882 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
NDRG1-229ENST00000537882 TTBK1Q5TCY1 1321 aaPredicted RBP17.26■□□□□ 0.35
NDRG1-229ENST00000537882 PRKCSHP14314 528 aaPredicted RBP17.24■□□□□ 0.35
NDRG1-229ENST00000537882 ABCC9O60706 1549 aa17.2■□□□□ 0.34
NDRG1-229ENST00000537882 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
NDRG1-229ENST00000537882 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
NDRG1-229ENST00000537882 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
NDRG1-229ENST00000537882 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
NDRG1-229ENST00000537882 YTHDC1Q96MU7 727 aaKnown RBP17■□□□□ 0.31
NDRG1-229ENST00000537882 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
NDRG1-229ENST00000537882 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
NDRG1-229ENST00000537882 MIER1Q8N108 512 aa16.93■□□□□ 0.3
NDRG1-229ENST00000537882 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
NDRG1-229ENST00000537882 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
NDRG1-229ENST00000537882 ANP32EQ9BTT0 268 aa16.9■□□□□ 0.3
NDRG1-229ENST00000537882 SUPT16HQ9Y5B9 1047 aaKnown RBP16.8■□□□□ 0.28
NDRG1-229ENST00000537882 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.27
NDRG1-229ENST00000537882 APLP2Q06481 763 aa16.68■□□□□ 0.26
NDRG1-229ENST00000537882 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
NDRG1-229ENST00000537882 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
NDRG1-229ENST00000537882 SCRIBQ14160 1630 aa16.63■□□□□ 0.25
NDRG1-229ENST00000537882 TNIKQ9UKE5 1360 aa16.61■□□□□ 0.25
NDRG1-229ENST00000537882 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
NDRG1-229ENST00000537882 ERICH6Q7L0X2 663 aa16.53■□□□□ 0.24
NDRG1-229ENST00000537882 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
NDRG1-229ENST00000537882 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
NDRG1-229ENST00000537882 EEA1Q15075 1411 aa16.45■□□□□ 0.22
NDRG1-229ENST00000537882 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
NDRG1-229ENST00000537882 WIZO95785 1651 aa16.44■□□□□ 0.22
NDRG1-229ENST00000537882 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
NDRG1-229ENST00000537882 BAZ1AQ9NRL2 1556 aaPredicted RBP16.42■□□□□ 0.22
NDRG1-229ENST00000537882 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
NDRG1-229ENST00000537882 SOGA1O94964 1423 aa16.37■□□□□ 0.21
NDRG1-229ENST00000537882 GOLGA3Q08378 1498 aa16.36■□□□□ 0.21
NDRG1-229ENST00000537882 RBM19Q9Y4C8 960 aaKnown RBP16.35■□□□□ 0.21
NDRG1-229ENST00000537882 UBTFP17480 764 aaKnown RBP16.33■□□□□ 0.21
NDRG1-229ENST00000537882 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.21
NDRG1-229ENST00000537882 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
NDRG1-229ENST00000537882 FKBP8Q14318 412 aa16.26■□□□□ 0.19
NDRG1-229ENST00000537882 BCANQ96GW7 911 aa16.26■□□□□ 0.19
NDRG1-229ENST00000537882 NACADO15069 1562 aa16.26■□□□□ 0.19
NDRG1-229ENST00000537882 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
NDRG1-229ENST00000537882 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
NDRG1-229ENST00000537882 CLIP1P30622 1438 aa16.21■□□□□ 0.19
NDRG1-229ENST00000537882 MSH5O43196 834 aa16.2■□□□□ 0.18
NDRG1-229ENST00000537882 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
NDRG1-229ENST00000537882 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
NDRG1-229ENST00000537882 KIF21BO75037 1637 aa16.17■□□□□ 0.18
NDRG1-229ENST00000537882 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
NDRG1-229ENST00000537882 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
NDRG1-229ENST00000537882 NEFLP07196 543 aa16.17■□□□□ 0.18
NDRG1-229ENST00000537882 MYT1LQ9UL68 1186 aa16.16■□□□□ 0.18
NDRG1-229ENST00000537882 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
NDRG1-229ENST00000537882 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
NDRG1-229ENST00000537882 CUX2O14529 1486 aa16.08■□□□□ 0.16
NDRG1-229ENST00000537882 ITGAEP38570 1179 aa16.04■□□□□ 0.16
NDRG1-229ENST00000537882 CCER2I3L3R5 266 aa16■□□□□ 0.15
NDRG1-229ENST00000537882 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
NDRG1-229ENST00000537882 DEKP35659 375 aaKnown RBP15.96■□□□□ 0.15
NDRG1-229ENST00000537882 CDK11AQ9UQ88 783 aaPredicted RBP15.96■□□□□ 0.15
NDRG1-229ENST00000537882 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
NDRG1-229ENST00000537882 PPP1R15AO75807 674 aaPredicted RBP15.95■□□□□ 0.14
NDRG1-229ENST00000537882 DDX10Q13206 875 aaKnown RBP15.94■□□□□ 0.14
NDRG1-229ENST00000537882 RAPGEF2Q9Y4G8 1499 aa15.94■□□□□ 0.14
NDRG1-229ENST00000537882 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
NDRG1-229ENST00000537882 MAPKBP1O60336 1514 aa15.91■□□□□ 0.14
NDRG1-229ENST00000537882 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
NDRG1-229ENST00000537882 ERICH6BQ5W0A0 696 aa15.87■□□□□ 0.13
NDRG1-229ENST00000537882 ANP32CO43423 234 aa15.86■□□□□ 0.13
NDRG1-229ENST00000537882 CCNB3Q8WWL7 1395 aa15.86■□□□□ 0.13
NDRG1-229ENST00000537882 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
NDRG1-229ENST00000537882 ARAP1Q96P48 1450 aa15.85■□□□□ 0.13
NDRG1-229ENST00000537882 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
NDRG1-229ENST00000537882 EIF5BO60841 1220 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms