RNA–Protein interactions for RNA: ENST00000617791.1

MALAT1-211, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 5 BASIC

Gene MALAT1, Length 394 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-211ENST00000617791 NISCHQ9Y2I1 1504 aa38.4■■■■□ 3.74
MALAT1-211ENST00000617791 ABCC9O60706 1549 aa34.45■■■■□ 3.11
MALAT1-211ENST00000617791 CCDC180Q9P1Z9 1646 aa34.39■■■■□ 3.1
MALAT1-211ENST00000617791 RB1CC1Q8TDY2 1594 aa32.77■■■□□ 2.84
MALAT1-211ENST00000617791 NACADO15069 1562 aa32.54■■■□□ 2.8
MALAT1-211ENST00000617791 DCAF8L2P0C7V8 631 aa32.54■■■□□ 2.8
MALAT1-211ENST00000617791 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
MALAT1-211ENST00000617791 PABPN1Q86U42 306 aaKnown RBP eCLIP32.12■■■□□ 2.73
MALAT1-211ENST00000617791 MYO15BQ96JP2 1530 aa32.06■■■□□ 2.72
MALAT1-211ENST00000617791 UNC13AQ9UPW8 1703 aa31.95■■■□□ 2.7
MALAT1-211ENST00000617791 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
MALAT1-211ENST00000617791 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
MALAT1-211ENST00000617791 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
MALAT1-211ENST00000617791 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
MALAT1-211ENST00000617791 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
MALAT1-211ENST00000617791 CC2D2AQ9P2K1 1620 aa31.07■■■□□ 2.56
MALAT1-211ENST00000617791 EIF4G1Q04637 1599 aaKnown RBP31.02■■■□□ 2.56
MALAT1-211ENST00000617791 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.56
MALAT1-211ENST00000617791 AEBP2Q6ZN18 517 aaPredicted RBP30.23■■■□□ 2.43
MALAT1-211ENST00000617791 NCAPD3P42695 1498 aa30.05■■■□□ 2.4
MALAT1-211ENST00000617791 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
MALAT1-211ENST00000617791 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
MALAT1-211ENST00000617791 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
MALAT1-211ENST00000617791 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
MALAT1-211ENST00000617791 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
MALAT1-211ENST00000617791 ERCC6Q03468 1493 aa29.77■■■□□ 2.36
MALAT1-211ENST00000617791 BAZ1BQ9UIG0 1483 aaKnown RBP29.72■■■□□ 2.35
MALAT1-211ENST00000617791 CUX2O14529 1486 aa29.63■■■□□ 2.33
MALAT1-211ENST00000617791 PEG3Q9GZU2 1588 aa29.61■■■□□ 2.33
MALAT1-211ENST00000617791 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
MALAT1-211ENST00000617791 NESP48681 1621 aa29.59■■■□□ 2.33
MALAT1-211ENST00000617791 DNAJC5Q9H3Z4 198 aa29.58■■■□□ 2.33
MALAT1-211ENST00000617791 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
MALAT1-211ENST00000617791 WIZO95785 1651 aa29.25■■■□□ 2.27
MALAT1-211ENST00000617791 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
MALAT1-211ENST00000617791 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
MALAT1-211ENST00000617791 CADPSQ9ULU8 1353 aa29.16■■■□□ 2.26
MALAT1-211ENST00000617791 KIF21AQ7Z4S6 1674 aa29.16■■■□□ 2.26
MALAT1-211ENST00000617791 RSF1Q96T23 1441 aaPredicted RBP29.02■■■□□ 2.24
MALAT1-211ENST00000617791 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
MALAT1-211ENST00000617791 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.21
MALAT1-211ENST00000617791 CEP164Q9UPV0 1460 aa28.87■■■□□ 2.21
MALAT1-211ENST00000617791 WDR62O43379 1518 aa28.86■■■□□ 2.21
MALAT1-211ENST00000617791 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
MALAT1-211ENST00000617791 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
MALAT1-211ENST00000617791 CFTRP13569 1480 aa28.82■■■□□ 2.2
MALAT1-211ENST00000617791 URB2Q14146 1524 aaKnown RBP28.58■■■□□ 2.17
MALAT1-211ENST00000617791 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
MALAT1-211ENST00000617791 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
MALAT1-211ENST00000617791 TRIM41Q8WV44 630 aa28.4■■■□□ 2.14
MALAT1-211ENST00000617791 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
MALAT1-211ENST00000617791 TOPBP1Q92547 1522 aa28.28■■■□□ 2.12
MALAT1-211ENST00000617791 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
MALAT1-211ENST00000617791 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
MALAT1-211ENST00000617791 ABCC8Q09428 1581 aa28.22■■■□□ 2.11
MALAT1-211ENST00000617791 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
MALAT1-211ENST00000617791 EIF4G3O43432 1585 aaKnown RBP28.06■■■□□ 2.08
MALAT1-211ENST00000617791 AQRO60306 1485 aaKnown RBP eCLIP28.01■■■□□ 2.07
MALAT1-211ENST00000617791 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
MALAT1-211ENST00000617791 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
MALAT1-211ENST00000617791 RAD54L2Q9Y4B4 1467 aa27.92■■■□□ 2.06
MALAT1-211ENST00000617791 RIMBP3CA6NJZ7 1639 aa27.91■■■□□ 2.06
MALAT1-211ENST00000617791 RIMBP3BA6NNM3 1639 aa27.91■■■□□ 2.06
MALAT1-211ENST00000617791 RIMBP3Q9UFD9 1639 aa27.91■■■□□ 2.06
MALAT1-211ENST00000617791 SOGA1O94964 1423 aa27.91■■■□□ 2.06
MALAT1-211ENST00000617791 FBLN2P98095 1184 aa27.88■■■□□ 2.05
MALAT1-211ENST00000617791 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
MALAT1-211ENST00000617791 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
MALAT1-211ENST00000617791 ARHGEF11O15085 1522 aa27.85■■■□□ 2.05
MALAT1-211ENST00000617791 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
MALAT1-211ENST00000617791 CHD1O14646 1710 aa27.82■■■□□ 2.04
MALAT1-211ENST00000617791 CUX1P39880 1505 aa27.82■■■□□ 2.04
MALAT1-211ENST00000617791 SNAPC4Q5SXM2 1469 aa27.71■■■□□ 2.03
MALAT1-211ENST00000617791 CYB5RLQ6IPT4 315 aa27.7■■■□□ 2.02
MALAT1-211ENST00000617791 WDR97A6NE52 1622 aa27.7■■■□□ 2.02
MALAT1-211ENST00000617791 CHMP7Q8WUX9 453 aaPredicted RBP27.65■■■□□ 2.02
MALAT1-211ENST00000617791 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
MALAT1-211ENST00000617791 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
MALAT1-211ENST00000617791 ARAP1Q96P48 1450 aa27.57■■■□□ 2
MALAT1-211ENST00000617791 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
MALAT1-211ENST00000617791 SYNJ1O43426 1573 aa27.53■■■□□ 2
MALAT1-211ENST00000617791 SYNJ2O15056 1496 aa27.53■■■□□ 2
MALAT1-211ENST00000617791 CLASP1Q7Z460 1538 aa27.51■■■□□ 2
MALAT1-211ENST00000617791 ABCA10Q8WWZ4 1543 aa27.51■■□□□ 1.99
MALAT1-211ENST00000617791 PBRM1Q86U86 1689 aa27.49■■□□□ 1.99
MALAT1-211ENST00000617791 WRNQ14191 1432 aaPredicted RBP eCLIP27.45■■□□□ 1.98
MALAT1-211ENST00000617791 ABCA5Q8WWZ7 1642 aa27.44■■□□□ 1.98
MALAT1-211ENST00000617791 TRHP20396 242 aaPredicted RBP27.41■■□□□ 1.98
MALAT1-211ENST00000617791 TOP2BQ02880 1626 aa27.36■■□□□ 1.97
MALAT1-211ENST00000617791 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
MALAT1-211ENST00000617791 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
MALAT1-211ENST00000617791 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
MALAT1-211ENST00000617791 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
MALAT1-211ENST00000617791 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
MALAT1-211ENST00000617791 NUP160Q12769 1436 aa27.16■■□□□ 1.94
MALAT1-211ENST00000617791 ERICH3Q5RHP9 1530 aa27.16■■□□□ 1.94
MALAT1-211ENST00000617791 ERCC6L2Q5T890 1561 aa27.11■■□□□ 1.93
MALAT1-211ENST00000617791 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
MALAT1-211ENST00000617791 PRG4Q92954 1404 aaPredicted RBP26.95■■□□□ 1.9
MALAT1-211ENST00000617791 JPH4Q96JJ6 628 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms