RNA–Protein interactions for RNA: ENST00000395136.6

SRSF11-204, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 1 (best)

Gene SRSF11, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-204ENST00000395136 NISCHQ9Y2I1 1504 aa63.41■■■■■ 7.74
SRSF11-204ENST00000395136 CCDC180Q9P1Z9 1646 aa56.45■■■■■ 6.63
SRSF11-204ENST00000395136 ABCC9O60706 1549 aa55.05■■■■■ 6.4
SRSF11-204ENST00000395136 RB1CC1Q8TDY2 1594 aa53.13■■■■■ 6.1
SRSF11-204ENST00000395136 NACADO15069 1562 aa53.09■■■■■ 6.09
SRSF11-204ENST00000395136 DCAF8L2P0C7V8 631 aa52.92■■■■■ 6.06
SRSF11-204ENST00000395136 MYO15BQ96JP2 1530 aa52.84■■■■■ 6.05
SRSF11-204ENST00000395136 ZCCHC6Q5VYS8 1495 aaKnown RBP52.8■■■■■ 6.04
SRSF11-204ENST00000395136 DCAF1Q9Y4B6 1507 aa52.58■■■■■ 6.01
SRSF11-204ENST00000395136 UNC13AQ9UPW8 1703 aa51.8■■■■■ 5.88
SRSF11-204ENST00000395136 PABPN1Q86U42 306 aaKnown RBP eCLIP51.42■■■■■ 5.822e-6■■■■□ 19.7
SRSF11-204ENST00000395136 BICRAQ9NZM4 1560 aa51.38■■■■■ 5.82
SRSF11-204ENST00000395136 SCRIBQ14160 1630 aa51.32■■■■■ 5.81
SRSF11-204ENST00000395136 SHROOM4Q9ULL8 1493 aa51.09■■■■■ 5.77
SRSF11-204ENST00000395136 DNAJC5BQ9UF47 199 aa50.87■■■■■ 5.73
SRSF11-204ENST00000395136 EIF4G1Q04637 1599 aaKnown RBP50.08■■■■■ 5.61
SRSF11-204ENST00000395136 CC2D2AQ9P2K1 1620 aa49.86■■■■■ 5.57
SRSF11-204ENST00000395136 CECR2Q9BXF3 1484 aa49.54■■■■■ 5.52
SRSF11-204ENST00000395136 BAZ1AQ9NRL2 1556 aaPredicted RBP49.2■■■■■ 5.47
SRSF11-204ENST00000395136 SMARCA4P51532 1647 aa49.18■■■■■ 5.46
SRSF11-204ENST00000395136 NCAPD3P42695 1498 aa48.97■■■■■ 5.43
SRSF11-204ENST00000395136 SMARCA2P51531 1590 aa48.95■■■■■ 5.43
SRSF11-204ENST00000395136 ATAD2BQ9ULI0 1458 aa48.93■■■■■ 5.42
SRSF11-204ENST00000395136 MROH2BQ7Z745 1585 aa48.78■■■■■ 5.4
SRSF11-204ENST00000395136 PEG3Q9GZU2 1588 aa48.78■■■■■ 5.4
SRSF11-204ENST00000395136 HMGXB3Q12766 1538 aa48.71■■■■■ 5.39
SRSF11-204ENST00000395136 BAZ1BQ9UIG0 1483 aaKnown RBP48.54■■■■■ 5.36
SRSF11-204ENST00000395136 RSF1Q96T23 1441 aaPredicted RBP48.27■■■■■ 5.32
SRSF11-204ENST00000395136 WIZO95785 1651 aa48.25■■■■■ 5.32
SRSF11-204ENST00000395136 TOP2AP11388 1531 aaKnown RBP47.82■■■■■ 5.25
SRSF11-204ENST00000395136 LAMC3Q9Y6N6 1575 aa47.68■■■■■ 5.22
SRSF11-204ENST00000395136 NESP48681 1621 aa47.6■■■■■ 5.21
SRSF11-204ENST00000395136 ERCC6Q03468 1493 aa47.55■■■■■ 5.2
SRSF11-204ENST00000395136 CADPSQ9ULU8 1353 aa47.52■■■■■ 5.2
SRSF11-204ENST00000395136 PDS5BQ9NTI5 1447 aa47.38■■■■■ 5.18
SRSF11-204ENST00000395136 CFTRP13569 1480 aa47.23■■■■■ 5.15
SRSF11-204ENST00000395136 CCDC88BA6NC98 1476 aa47.22■■■■■ 5.15
SRSF11-204ENST00000395136 CUX2O14529 1486 aa47.12■■■■■ 5.13
SRSF11-204ENST00000395136 KIF21AQ7Z4S6 1674 aa47.1■■■■■ 5.13
SRSF11-204ENST00000395136 SUPT5HO00267 1087 aaKnown RBP47■■■■■ 5.11
SRSF11-204ENST00000395136 THOC2Q8NI27 1593 aaKnown RBP46.95■■■■■ 5.11
SRSF11-204ENST00000395136 FANCD2Q9BXW9 1451 aa46.92■■■■■ 5.1
SRSF11-204ENST00000395136 PRDM2Q13029 1718 aa46.9■■■■■ 5.1
SRSF11-204ENST00000395136 CEP164Q9UPV0 1460 aa46.89■■■■■ 5.1
SRSF11-204ENST00000395136 MRC2Q9UBG0 1479 aa46.81■■■■■ 5.08
SRSF11-204ENST00000395136 WDR62O43379 1518 aa46.66■■■■■ 5.06
SRSF11-204ENST00000395136 DNAJC5Q9H3Z4 198 aa46.64■■■■■ 5.06
SRSF11-204ENST00000395136 URB2Q14146 1524 aaKnown RBP46.39■■■■■ 5.02
SRSF11-204ENST00000395136 ABCC8Q09428 1581 aa46.35■■■■■ 5.01
SRSF11-204ENST00000395136 TOPBP1Q92547 1522 aa46.17■■■■■ 4.98
SRSF11-204ENST00000395136 DNMBPQ6XZF7 1577 aa46.15■■■■■ 4.98
SRSF11-204ENST00000395136 IFT140Q96RY7 1462 aa45.94■■■■■ 4.94
SRSF11-204ENST00000395136 CUX1P39880 1505 aa45.77■■■■■ 4.92
SRSF11-204ENST00000395136 POLA1P09884 1462 aaPredicted RBP45.76■■■■■ 4.92
SRSF11-204ENST00000395136 TARBP1Q13395 1621 aaKnown RBP45.66■■■■■ 4.9
SRSF11-204ENST00000395136 FGD5Q6ZNL6 1462 aa45.64■■■■■ 4.9
SRSF11-204ENST00000395136 SOGA1O94964 1423 aa45.63■■■■■ 4.9
SRSF11-204ENST00000395136 ZNF608Q9ULD9 1512 aaPredicted RBP45.59■■■■■ 4.89
SRSF11-204ENST00000395136 WRNQ14191 1432 aaPredicted RBP eCLIP45.56■■■■■ 4.88
SRSF11-204ENST00000395136 RAD54L2Q9Y4B4 1467 aa45.5■■■■■ 4.87
SRSF11-204ENST00000395136 WDR97A6NE52 1622 aa45.46■■■■■ 4.87
SRSF11-204ENST00000395136 EIF4G3O43432 1585 aaKnown RBP45.46■■■■■ 4.87
SRSF11-204ENST00000395136 TOP2BQ02880 1626 aa45.46■■■■■ 4.87
SRSF11-204ENST00000395136 BIVM-ERCC5R4GMW8 1640 aa45.45■■■■■ 4.87
SRSF11-204ENST00000395136 AQRO60306 1485 aaKnown RBP eCLIP45.37■■■■■ 4.852e-7■■■□□ 15.2
SRSF11-204ENST00000395136 SYNJ1O43426 1573 aa45.34■■■■■ 4.85
SRSF11-204ENST00000395136 TDRD9Q8NDG6 1382 aaKnown RBP45.3■■■■■ 4.84
SRSF11-204ENST00000395136 ABCA10Q8WWZ4 1543 aa45.27■■■■■ 4.84
SRSF11-204ENST00000395136 OSCARQ8IYS5 282 aa45.18■■■■■ 4.82
SRSF11-204ENST00000395136 GRIN2BQ13224 1484 aa45.11■■■■■ 4.81
SRSF11-204ENST00000395136 GAPVD1Q14C86 1478 aa45.1■■■■■ 4.81
SRSF11-204ENST00000395136 ABCA5Q8WWZ7 1642 aa45.04■■■■■ 4.8
SRSF11-204ENST00000395136 MAGI1Q96QZ7 1491 aaPredicted RBP45.02■■■■■ 4.8
SRSF11-204ENST00000395136 PBRM1Q86U86 1689 aa44.96■■■■■ 4.79
SRSF11-204ENST00000395136 SNAPC4Q5SXM2 1469 aa44.96■■■■■ 4.79
SRSF11-204ENST00000395136 CHD1O14646 1710 aa44.88■■■■■ 4.78
SRSF11-204ENST00000395136 FBLN2P98095 1184 aa44.86■■■■■ 4.77
SRSF11-204ENST00000395136 CHMP7Q8WUX9 453 aaPredicted RBP44.82■■■■■ 4.77
SRSF11-204ENST00000395136 SYNJ2O15056 1496 aa44.81■■■■■ 4.76
SRSF11-204ENST00000395136 ERICH3Q5RHP9 1530 aa44.76■■■■■ 4.76
SRSF11-204ENST00000395136 KIF27Q86VH2 1401 aa44.66■■■■■ 4.74
SRSF11-204ENST00000395136 TRIM41Q8WV44 630 aa44.66■■■■■ 4.74
SRSF11-204ENST00000395136 FHAD1B1AJZ9 1412 aa44.61■■■■■ 4.73
SRSF11-204ENST00000395136 ADAMTS12P58397 1594 aa44.6■■■■■ 4.73
SRSF11-204ENST00000395136 GRIN2AQ12879 1464 aa44.49■■■■■ 4.71
SRSF11-204ENST00000395136 IGF1RP08069 1367 aa44.42■■■■■ 4.7
SRSF11-204ENST00000395136 CLASP1Q7Z460 1538 aa44.42■■■■■ 4.7
SRSF11-204ENST00000395136 CUL7Q14999 1698 aa44.35■■■■■ 4.69
SRSF11-204ENST00000395136 ARHGEF11O15085 1522 aa44.34■■■■■ 4.69
SRSF11-204ENST00000395136 RIMBP3CA6NJZ7 1639 aa44.32■■■■■ 4.69
SRSF11-204ENST00000395136 RIMBP3BA6NNM3 1639 aa44.32■■■■■ 4.69
SRSF11-204ENST00000395136 RIMBP3Q9UFD9 1639 aa44.32■■■■■ 4.69
SRSF11-204ENST00000395136 NUP160Q12769 1436 aa44.31■■■■■ 4.68
SRSF11-204ENST00000395136 CEP170Q5SW79 1584 aa44.2■■■■■ 4.67
SRSF11-204ENST00000395136 CARMIL1Q5VZK9 1371 aa44.18■■■■■ 4.66
SRSF11-204ENST00000395136 RUSC2Q8N2Y8 1516 aa44.05■■■■■ 4.64
SRSF11-204ENST00000395136 SHROOM2Q13796 1616 aa43.97■■■■■ 4.63
SRSF11-204ENST00000395136 CYB5RLQ6IPT4 315 aa43.94■■■■■ 4.62
SRSF11-204ENST00000395136 ARAP1Q96P48 1450 aa43.94■■■■■ 4.62
SRSF11-204ENST00000395136 KIAA0586Q9BVV6 1533 aa43.93■■■■■ 4.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms