RNA–Protein interactions for RNA: ENST00000415913.5

IDH1-203, Transcript of isocitrate dehydrogenase (NADP(+)) 1, cytosolic, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH1-203ENST00000415913 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
IDH1-203ENST00000415913 ABCC9O60706 1549 aa23.65■■□□□ 1.38
IDH1-203ENST00000415913 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
IDH1-203ENST00000415913 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
IDH1-203ENST00000415913 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.16
IDH1-203ENST00000415913 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
IDH1-203ENST00000415913 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.13
IDH1-203ENST00000415913 NACADO15069 1562 aa22.12■■□□□ 1.13
IDH1-203ENST00000415913 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
IDH1-203ENST00000415913 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
IDH1-203ENST00000415913 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
IDH1-203ENST00000415913 BICRAQ9NZM4 1560 aa21.68■■□□□ 1.06
IDH1-203ENST00000415913 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
IDH1-203ENST00000415913 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
IDH1-203ENST00000415913 SHROOM4Q9ULL8 1493 aa21.22■□□□□ 0.99
IDH1-203ENST00000415913 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
IDH1-203ENST00000415913 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
IDH1-203ENST00000415913 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
IDH1-203ENST00000415913 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
IDH1-203ENST00000415913 SMARCA4P51532 1647 aa20.52■□□□□ 0.88
IDH1-203ENST00000415913 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
IDH1-203ENST00000415913 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
IDH1-203ENST00000415913 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
IDH1-203ENST00000415913 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
IDH1-203ENST00000415913 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
IDH1-203ENST00000415913 NESP48681 1621 aa20.38■□□□□ 0.85
IDH1-203ENST00000415913 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
IDH1-203ENST00000415913 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
IDH1-203ENST00000415913 WIZO95785 1651 aa20.23■□□□□ 0.83
IDH1-203ENST00000415913 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
IDH1-203ENST00000415913 RSF1Q96T23 1441 aaPredicted RBP20.13■□□□□ 0.81
IDH1-203ENST00000415913 CADPSQ9ULU8 1353 aa20.01■□□□□ 0.79
IDH1-203ENST00000415913 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
IDH1-203ENST00000415913 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
IDH1-203ENST00000415913 CUX2O14529 1486 aa19.95■□□□□ 0.78
IDH1-203ENST00000415913 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
IDH1-203ENST00000415913 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
IDH1-203ENST00000415913 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
IDH1-203ENST00000415913 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.77
IDH1-203ENST00000415913 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.76
IDH1-203ENST00000415913 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
IDH1-203ENST00000415913 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
IDH1-203ENST00000415913 CFTRP13569 1480 aa19.76■□□□□ 0.75
IDH1-203ENST00000415913 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
IDH1-203ENST00000415913 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
IDH1-203ENST00000415913 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
IDH1-203ENST00000415913 WDR62O43379 1518 aa19.61■□□□□ 0.73
IDH1-203ENST00000415913 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
IDH1-203ENST00000415913 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
IDH1-203ENST00000415913 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
IDH1-203ENST00000415913 FBLN2P98095 1184 aa19.39■□□□□ 0.69
IDH1-203ENST00000415913 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
IDH1-203ENST00000415913 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.691e-7■■■□□ 15.5
IDH1-203ENST00000415913 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
IDH1-203ENST00000415913 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
IDH1-203ENST00000415913 TDRD9Q8NDG6 1382 aaKnown RBP19.31■□□□□ 0.68
IDH1-203ENST00000415913 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
IDH1-203ENST00000415913 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
IDH1-203ENST00000415913 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
IDH1-203ENST00000415913 SOGA1O94964 1423 aa19.24■□□□□ 0.67
IDH1-203ENST00000415913 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
IDH1-203ENST00000415913 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
IDH1-203ENST00000415913 CUX1P39880 1505 aa19.18■□□□□ 0.66
IDH1-203ENST00000415913 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
IDH1-203ENST00000415913 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
IDH1-203ENST00000415913 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
IDH1-203ENST00000415913 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
IDH1-203ENST00000415913 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.64
IDH1-203ENST00000415913 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
IDH1-203ENST00000415913 CHD1O14646 1710 aa18.97■□□□□ 0.63
IDH1-203ENST00000415913 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
IDH1-203ENST00000415913 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
IDH1-203ENST00000415913 RIMBP3CA6NJZ7 1639 aa18.94■□□□□ 0.62
IDH1-203ENST00000415913 RIMBP3BA6NNM3 1639 aa18.94■□□□□ 0.62
IDH1-203ENST00000415913 RIMBP3Q9UFD9 1639 aa18.94■□□□□ 0.62
IDH1-203ENST00000415913 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
IDH1-203ENST00000415913 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
IDH1-203ENST00000415913 ABCA10Q8WWZ4 1543 aa18.87■□□□□ 0.61
IDH1-203ENST00000415913 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
IDH1-203ENST00000415913 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
IDH1-203ENST00000415913 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
IDH1-203ENST00000415913 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
IDH1-203ENST00000415913 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
IDH1-203ENST00000415913 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
IDH1-203ENST00000415913 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
IDH1-203ENST00000415913 ABCA5Q8WWZ7 1642 aa18.76■□□□□ 0.59
IDH1-203ENST00000415913 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
IDH1-203ENST00000415913 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
IDH1-203ENST00000415913 GRIN2AQ12879 1464 aa18.7■□□□□ 0.58
IDH1-203ENST00000415913 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
IDH1-203ENST00000415913 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
IDH1-203ENST00000415913 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
IDH1-203ENST00000415913 JPH4Q96JJ6 628 aa18.63■□□□□ 0.57
IDH1-203ENST00000415913 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
IDH1-203ENST00000415913 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
IDH1-203ENST00000415913 IGF1RP08069 1367 aa18.62■□□□□ 0.57
IDH1-203ENST00000415913 ERICH3Q5RHP9 1530 aa18.58■□□□□ 0.57
IDH1-203ENST00000415913 NUP160Q12769 1436 aa18.57■□□□□ 0.56
IDH1-203ENST00000415913 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
IDH1-203ENST00000415913 PRG4Q92954 1404 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms