RNA–Protein interactions for RNA: ENST00000446179.5

IDH1-205, Transcript of isocitrate dehydrogenase (NADP(+)) 1, cytosolic, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH1, Length 2,298 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH1-205ENST00000446179 NISCHQ9Y2I1 1504 aa44.07■■■■■ 4.65
IDH1-205ENST00000446179 CCDC180Q9P1Z9 1646 aa38.01■■■■□ 3.68
IDH1-205ENST00000446179 ZCCHC6Q5VYS8 1495 aaKnown RBP37.12■■■■□ 3.53
IDH1-205ENST00000446179 SHROOM4Q9ULL8 1493 aa36.64■■■■□ 3.46
IDH1-205ENST00000446179 DCAF8L2P0C7V8 631 aa36.48■■■■□ 3.43
IDH1-205ENST00000446179 DCAF1Q9Y4B6 1507 aa36.32■■■■□ 3.4
IDH1-205ENST00000446179 ABCC9O60706 1549 aa35.65■■■■□ 3.3
IDH1-205ENST00000446179 MYO15BQ96JP2 1530 aa35.63■■■■□ 3.29
IDH1-205ENST00000446179 SUPT5HO00267 1087 aaKnown RBP35.56■■■■□ 3.28
IDH1-205ENST00000446179 NACADO15069 1562 aa35.31■■■■□ 3.24
IDH1-205ENST00000446179 SCRIBQ14160 1630 aa35.25■■■■□ 3.23
IDH1-205ENST00000446179 RB1CC1Q8TDY2 1594 aa34.89■■■■□ 3.18
IDH1-205ENST00000446179 RSF1Q96T23 1441 aaPredicted RBP34.48■■■■□ 3.11
IDH1-205ENST00000446179 CECR2Q9BXF3 1484 aa34.31■■■■□ 3.08
IDH1-205ENST00000446179 CHIC1Q5VXU3 224 aa34.28■■■■□ 3.08
IDH1-205ENST00000446179 UNC13AQ9UPW8 1703 aa34.27■■■■□ 3.08
IDH1-205ENST00000446179 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
IDH1-205ENST00000446179 BAZ1AQ9NRL2 1556 aaPredicted RBP33.95■■■■□ 3.03
IDH1-205ENST00000446179 WIZO95785 1651 aa33.91■■■■□ 3.02
IDH1-205ENST00000446179 BICRAQ9NZM4 1560 aa33.89■■■■□ 3.02
IDH1-205ENST00000446179 PABPN1Q86U42 306 aaKnown RBP eCLIP33.84■■■■□ 3.01
IDH1-205ENST00000446179 SMARCA4P51532 1647 aa33.74■■■□□ 2.99
IDH1-205ENST00000446179 TOP2AP11388 1531 aaKnown RBP33.47■■■□□ 2.95
IDH1-205ENST00000446179 TRIM41Q8WV44 630 aa33.31■■■□□ 2.92
IDH1-205ENST00000446179 CCDC88BA6NC98 1476 aa33.23■■■□□ 2.91
IDH1-205ENST00000446179 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
IDH1-205ENST00000446179 SMARCA2P51531 1590 aa33.22■■■□□ 2.91
IDH1-205ENST00000446179 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
IDH1-205ENST00000446179 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
IDH1-205ENST00000446179 ATAD2BQ9ULI0 1458 aa33.06■■■□□ 2.88
IDH1-205ENST00000446179 BAZ1BQ9UIG0 1483 aaKnown RBP32.92■■■□□ 2.86
IDH1-205ENST00000446179 FAM9AQ8IZU1 332 aaPredicted RBP32.84■■■□□ 2.85
IDH1-205ENST00000446179 ABCC8Q09428 1581 aa32.78■■■□□ 2.84
IDH1-205ENST00000446179 NCAPD3P42695 1498 aa32.63■■■□□ 2.81
IDH1-205ENST00000446179 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
IDH1-205ENST00000446179 EHMT2Q96KQ7 1210 aa32.46■■■□□ 2.79
IDH1-205ENST00000446179 WRNQ14191 1432 aaPredicted RBP eCLIP32.43■■■□□ 2.78
IDH1-205ENST00000446179 SOGA1O94964 1423 aa32.31■■■□□ 2.76
IDH1-205ENST00000446179 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
IDH1-205ENST00000446179 PCGF6Q9BYE7 350 aa32.23■■■□□ 2.75
IDH1-205ENST00000446179 CC2D2AQ9P2K1 1620 aa32.2■■■□□ 2.75
IDH1-205ENST00000446179 EEA1Q15075 1411 aa32.19■■■□□ 2.74
IDH1-205ENST00000446179 RUSC2Q8N2Y8 1516 aa32.17■■■□□ 2.74
IDH1-205ENST00000446179 CSRNP3Q8WYN3 585 aa32.11■■■□□ 2.73
IDH1-205ENST00000446179 CFTRP13569 1480 aa32.1■■■□□ 2.73
IDH1-205ENST00000446179 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
IDH1-205ENST00000446179 BIVM-ERCC5R4GMW8 1640 aa31.97■■■□□ 2.71
IDH1-205ENST00000446179 TRIM26Q12899 539 aaPredicted RBP31.96■■■□□ 2.71
IDH1-205ENST00000446179 CADPSQ9ULU8 1353 aa31.89■■■□□ 2.7
IDH1-205ENST00000446179 PRDM2Q13029 1718 aa31.88■■■□□ 2.69
IDH1-205ENST00000446179 TNIKQ9UKE5 1360 aa31.88■■■□□ 2.69
IDH1-205ENST00000446179 CUX1P39880 1505 aa31.86■■■□□ 2.69
IDH1-205ENST00000446179 GOLGA3Q08378 1498 aa31.85■■■□□ 2.69
IDH1-205ENST00000446179 UBTFP17480 764 aaKnown RBP31.82■■■□□ 2.68
IDH1-205ENST00000446179 CEP162Q5TB80 1403 aa31.8■■■□□ 2.68
IDH1-205ENST00000446179 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
IDH1-205ENST00000446179 KIF21BO75037 1637 aa31.76■■■□□ 2.68
IDH1-205ENST00000446179 HRCP23327 699 aa31.72■■■□□ 2.67
IDH1-205ENST00000446179 RAPGEF2Q9Y4G8 1499 aa31.6■■■□□ 2.65
IDH1-205ENST00000446179 PPARGC1BQ86YN6 1023 aaKnown RBP31.57■■■□□ 2.64
IDH1-205ENST00000446179 FANCD2Q9BXW9 1451 aa31.55■■■□□ 2.64
IDH1-205ENST00000446179 KIF27Q86VH2 1401 aa31.54■■■□□ 2.64
IDH1-205ENST00000446179 NESP48681 1621 aa31.51■■■□□ 2.63
IDH1-205ENST00000446179 PRXQ9BXM0 1461 aa31.47■■■□□ 2.63
IDH1-205ENST00000446179 ERICH3Q5RHP9 1530 aa31.43■■■□□ 2.62
IDH1-205ENST00000446179 FGD5Q6ZNL6 1462 aa31.42■■■□□ 2.62
IDH1-205ENST00000446179 DNAJC5BQ9UF47 199 aa31.41■■■□□ 2.62
IDH1-205ENST00000446179 CLIP1P30622 1438 aa31.41■■■□□ 2.62
IDH1-205ENST00000446179 LAMC3Q9Y6N6 1575 aa31.4■■■□□ 2.62
IDH1-205ENST00000446179 CUX2O14529 1486 aa31.36■■■□□ 2.61
IDH1-205ENST00000446179 DNMBPQ6XZF7 1577 aa31.32■■■□□ 2.6
IDH1-205ENST00000446179 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
IDH1-205ENST00000446179 RANGAP1P46060 587 aaPredicted RBP31.25■■■□□ 2.59
IDH1-205ENST00000446179 IGF1RP08069 1367 aa31.24■■■□□ 2.59
IDH1-205ENST00000446179 TTBK1Q5TCY1 1321 aaPredicted RBP31.2■■■□□ 2.59
IDH1-205ENST00000446179 VPS8Q8N3P4 1428 aa31.19■■■□□ 2.58
IDH1-205ENST00000446179 PDS5BQ9NTI5 1447 aa31.18■■■□□ 2.58
IDH1-205ENST00000446179 POLA1P09884 1462 aaPredicted RBP31.18■■■□□ 2.58
IDH1-205ENST00000446179 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
IDH1-205ENST00000446179 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.57
IDH1-205ENST00000446179 ABCA10Q8WWZ4 1543 aa31.11■■■□□ 2.57
IDH1-205ENST00000446179 CARMIL1Q5VZK9 1371 aa31.09■■■□□ 2.57
IDH1-205ENST00000446179 KIF21AQ7Z4S6 1674 aa31.05■■■□□ 2.56
IDH1-205ENST00000446179 ARAP1Q96P48 1450 aa31.01■■■□□ 2.55
IDH1-205ENST00000446179 APLP2Q06481 763 aa30.97■■■□□ 2.55
IDH1-205ENST00000446179 ZEB1P37275 1124 aaPredicted RBP30.93■■■□□ 2.54
IDH1-205ENST00000446179 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
IDH1-205ENST00000446179 ARHGAP35Q9NRY4 1499 aa30.9■■■□□ 2.54
IDH1-205ENST00000446179 CUL7Q14999 1698 aa30.83■■■□□ 2.53
IDH1-205ENST00000446179 TDRD9Q8NDG6 1382 aaKnown RBP30.82■■■□□ 2.52
IDH1-205ENST00000446179 ABCA5Q8WWZ7 1642 aa30.79■■■□□ 2.52
IDH1-205ENST00000446179 GAPVD1Q14C86 1478 aa30.75■■■□□ 2.51
IDH1-205ENST00000446179 MRC2Q9UBG0 1479 aa30.74■■■□□ 2.51
IDH1-205ENST00000446179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.73■■■□□ 2.51
IDH1-205ENST00000446179 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
IDH1-205ENST00000446179 CCER1Q8TC90 406 aaPredicted RBP30.65■■■□□ 2.5
IDH1-205ENST00000446179 KANK4Q5T7N3 995 aaPredicted RBP30.64■■■□□ 2.5
IDH1-205ENST00000446179 CTTNBP2Q8WZ74 1663 aa30.6■■■□□ 2.49
IDH1-205ENST00000446179 P3H3Q8IVL6 736 aa30.55■■■□□ 2.48
IDH1-205ENST00000446179 HNRNPUL2Q1KMD3 747 aaKnown RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms