RNA–Protein interactions for RNA: ENST00000352591.9

CEACAM1-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 3,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-203ENST00000352591 NISCHQ9Y2I1 1504 aa14.04□□□□□ -0.16
CEACAM1-203ENST00000352591 CCDC180Q9P1Z9 1646 aa12.11□□□□□ -0.47
CEACAM1-203ENST00000352591 SHROOM4Q9ULL8 1493 aa11.88□□□□□ -0.51
CEACAM1-203ENST00000352591 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
CEACAM1-203ENST00000352591 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
CEACAM1-203ENST00000352591 SUPT5HO00267 1087 aaKnown RBP11.67□□□□□ -0.54
CEACAM1-203ENST00000352591 DCAF1Q9Y4B6 1507 aa11.57□□□□□ -0.56
CEACAM1-203ENST00000352591 MYO15BQ96JP2 1530 aa11.32□□□□□ -0.6
CEACAM1-203ENST00000352591 ABCC9O60706 1549 aa11.28□□□□□ -0.6
CEACAM1-203ENST00000352591 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
CEACAM1-203ENST00000352591 NACADO15069 1562 aa11.2□□□□□ -0.62
CEACAM1-203ENST00000352591 EHMT2Q96KQ7 1210 aa11.16□□□□□ -0.62
CEACAM1-203ENST00000352591 RB1CC1Q8TDY2 1594 aa11.06□□□□□ -0.64
CEACAM1-203ENST00000352591 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
CEACAM1-203ENST00000352591 CHIC1Q5VXU3 224 aa10.97□□□□□ -0.65
CEACAM1-203ENST00000352591 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
CEACAM1-203ENST00000352591 CECR2Q9BXF3 1484 aa10.94□□□□□ -0.66
CEACAM1-203ENST00000352591 FAM9AQ8IZU1 332 aaPredicted RBP10.93□□□□□ -0.66
CEACAM1-203ENST00000352591 LOC105371045A0A1W2PR82 267 aa10.9□□□□□ -0.66
CEACAM1-203ENST00000352591 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.67
CEACAM1-203ENST00000352591 PCGF6Q9BYE7 350 aa10.89□□□□□ -0.67
CEACAM1-203ENST00000352591 WIZO95785 1651 aa10.84□□□□□ -0.67
CEACAM1-203ENST00000352591 BAZ1AQ9NRL2 1556 aaPredicted RBP10.81□□□□□ -0.68
CEACAM1-203ENST00000352591 BICRAQ9NZM4 1560 aa10.79□□□□□ -0.68
CEACAM1-203ENST00000352591 SMARCA4P51532 1647 aa10.76□□□□□ -0.69
CEACAM1-203ENST00000352591 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
CEACAM1-203ENST00000352591 TTBK1Q5TCY1 1321 aaPredicted RBP10.72□□□□□ -0.69
CEACAM1-203ENST00000352591 PABPN1Q86U42 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
CEACAM1-203ENST00000352591 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
CEACAM1-203ENST00000352591 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
CEACAM1-203ENST00000352591 TRIM41Q8WV44 630 aa10.63□□□□□ -0.71
CEACAM1-203ENST00000352591 SMARCA2P51531 1590 aa10.62□□□□□ -0.71
CEACAM1-203ENST00000352591 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
CEACAM1-203ENST00000352591 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
CEACAM1-203ENST00000352591 HRCP23327 699 aa10.51□□□□□ -0.73
CEACAM1-203ENST00000352591 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
CEACAM1-203ENST00000352591 ABCC8Q09428 1581 aa10.5□□□□□ -0.73
CEACAM1-203ENST00000352591 RANGAP1P46060 587 aaPredicted RBP10.49□□□□□ -0.73
CEACAM1-203ENST00000352591 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
CEACAM1-203ENST00000352591 HMGXB3Q12766 1538 aa10.36□□□□□ -0.75
CEACAM1-203ENST00000352591 NCAPD3P42695 1498 aa10.34□□□□□ -0.75
CEACAM1-203ENST00000352591 SYNJ1O43426 1573 aa10.34□□□□□ -0.75
CEACAM1-203ENST00000352591 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
CEACAM1-203ENST00000352591 SOGA1O94964 1423 aa10.33□□□□□ -0.76
CEACAM1-203ENST00000352591 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
CEACAM1-203ENST00000352591 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
CEACAM1-203ENST00000352591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
CEACAM1-203ENST00000352591 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.77
CEACAM1-203ENST00000352591 EEA1Q15075 1411 aa10.26□□□□□ -0.77
CEACAM1-203ENST00000352591 TOP2BQ02880 1626 aa10.23□□□□□ -0.77
CEACAM1-203ENST00000352591 BIVM-ERCC5R4GMW8 1640 aa10.23□□□□□ -0.77
CEACAM1-203ENST00000352591 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.77
CEACAM1-203ENST00000352591 CCER1Q8TC90 406 aaPredicted RBP10.2□□□□□ -0.78
CEACAM1-203ENST00000352591 CFTRP13569 1480 aa10.2□□□□□ -0.78
CEACAM1-203ENST00000352591 CSRNP3Q8WYN3 585 aa10.2□□□□□ -0.78
CEACAM1-203ENST00000352591 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
CEACAM1-203ENST00000352591 CEP162Q5TB80 1403 aa10.18□□□□□ -0.78
CEACAM1-203ENST00000352591 KIF21BO75037 1637 aa10.18□□□□□ -0.78
CEACAM1-203ENST00000352591 TNIKQ9UKE5 1360 aa10.18□□□□□ -0.78
CEACAM1-203ENST00000352591 GOLGA3Q08378 1498 aa10.17□□□□□ -0.78
CEACAM1-203ENST00000352591 CUX1P39880 1505 aa10.17□□□□□ -0.78
CEACAM1-203ENST00000352591 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
CEACAM1-203ENST00000352591 HNRNPUL2Q1KMD3 747 aaKnown RBP10.11□□□□□ -0.79
CEACAM1-203ENST00000352591 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
CEACAM1-203ENST00000352591 CADPSQ9ULU8 1353 aa10.09□□□□□ -0.79
CEACAM1-203ENST00000352591 PRXQ9BXM0 1461 aa10.05□□□□□ -0.8
CEACAM1-203ENST00000352591 ERICH3Q5RHP9 1530 aa10.05□□□□□ -0.8
CEACAM1-203ENST00000352591 CLIP1P30622 1438 aa10.02□□□□□ -0.8
CEACAM1-203ENST00000352591 YTHDC1Q96MU7 727 aaKnown RBP10.02□□□□□ -0.8
CEACAM1-203ENST00000352591 KIF27Q86VH2 1401 aa10.02□□□□□ -0.81
CEACAM1-203ENST00000352591 ITGAEP38570 1179 aa10.02□□□□□ -0.81
CEACAM1-203ENST00000352591 FANCD2Q9BXW9 1451 aa10.01□□□□□ -0.81
CEACAM1-203ENST00000352591 NESP48681 1621 aa10.01□□□□□ -0.81
CEACAM1-203ENST00000352591 FGD5Q6ZNL6 1462 aa10□□□□□ -0.81
CEACAM1-203ENST00000352591 ATP1B4Q9UN42 357 aaPredicted RBP10□□□□□ -0.81
CEACAM1-203ENST00000352591 APLP2Q06481 763 aa9.99□□□□□ -0.81
CEACAM1-203ENST00000352591 VPS8Q8N3P4 1428 aa9.97□□□□□ -0.81
CEACAM1-203ENST00000352591 CUX2O14529 1486 aa9.97□□□□□ -0.81
CEACAM1-203ENST00000352591 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
CEACAM1-203ENST00000352591 LAMC3Q9Y6N6 1575 aa9.96□□□□□ -0.82
CEACAM1-203ENST00000352591 ZEB1P37275 1124 aaPredicted RBP9.96□□□□□ -0.82
CEACAM1-203ENST00000352591 ARAP1Q96P48 1450 aa9.94□□□□□ -0.82
CEACAM1-203ENST00000352591 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
CEACAM1-203ENST00000352591 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
CEACAM1-203ENST00000352591 IGF1RP08069 1367 aa9.93□□□□□ -0.82
CEACAM1-203ENST00000352591 POLA1P09884 1462 aaPredicted RBP9.92□□□□□ -0.82
CEACAM1-203ENST00000352591 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
CEACAM1-203ENST00000352591 URB2Q14146 1524 aaKnown RBP9.9□□□□□ -0.82
CEACAM1-203ENST00000352591 ABCA10Q8WWZ4 1543 aa9.9□□□□□ -0.82
CEACAM1-203ENST00000352591 WDR97A6NE52 1622 aa9.9□□□□□ -0.83
CEACAM1-203ENST00000352591 KIF21AQ7Z4S6 1674 aa9.89□□□□□ -0.83
CEACAM1-203ENST00000352591 P3H3Q8IVL6 736 aa9.88□□□□□ -0.83
CEACAM1-203ENST00000352591 ARHGAP35Q9NRY4 1499 aa9.88□□□□□ -0.83
CEACAM1-203ENST00000352591 CARMIL1Q5VZK9 1371 aa9.87□□□□□ -0.83
CEACAM1-203ENST00000352591 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
CEACAM1-203ENST00000352591 PDS5BQ9NTI5 1447 aa9.84□□□□□ -0.83
CEACAM1-203ENST00000352591 CUL7Q14999 1698 aa9.83□□□□□ -0.84
CEACAM1-203ENST00000352591 ABCA5Q8WWZ7 1642 aa9.83□□□□□ -0.84
CEACAM1-203ENST00000352591 SCAF1Q9H7N4 1312 aaKnown RBP9.81□□□□□ -0.84
CEACAM1-203ENST00000352591 CTTNBP2Q8WZ74 1663 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms