RNA–Protein interactions for RNA: ENST00000444761.6

MCFD2-212, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 2 BASIC

Gene MCFD2, Length 4,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-212ENST00000444761 NISCHQ9Y2I1 1504 aa25.55■■□□□ 1.68
MCFD2-212ENST00000444761 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
MCFD2-212ENST00000444761 SHROOM4Q9ULL8 1493 aa23.04■■□□□ 1.28
MCFD2-212ENST00000444761 SUPT5HO00267 1087 aaKnown RBP22.71■■□□□ 1.23
MCFD2-212ENST00000444761 ABCC9O60706 1549 aa21.67■■□□□ 1.06
MCFD2-212ENST00000444761 EHMT2Q96KQ7 1210 aa21.54■■□□□ 1.04
MCFD2-212ENST00000444761 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
MCFD2-212ENST00000444761 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
MCFD2-212ENST00000444761 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
MCFD2-212ENST00000444761 PABPN1Q86U42 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
MCFD2-212ENST00000444761 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
MCFD2-212ENST00000444761 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
MCFD2-212ENST00000444761 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
MCFD2-212ENST00000444761 SCRIBQ14160 1630 aa20.87■□□□□ 0.93
MCFD2-212ENST00000444761 LOC105371045A0A1W2PR82 267 aa20.72■□□□□ 0.91
MCFD2-212ENST00000444761 PELP1Q8IZL8 1130 aaKnown RBP20.66■□□□□ 0.9
MCFD2-212ENST00000444761 TTBK1Q5TCY1 1321 aaPredicted RBP20.64■□□□□ 0.89
MCFD2-212ENST00000444761 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
MCFD2-212ENST00000444761 HRCP23327 699 aa20.56■□□□□ 0.88
MCFD2-212ENST00000444761 PPARGC1BQ86YN6 1023 aaKnown RBP20.43■□□□□ 0.86
MCFD2-212ENST00000444761 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
MCFD2-212ENST00000444761 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
MCFD2-212ENST00000444761 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
MCFD2-212ENST00000444761 NACADO15069 1562 aa20.32■□□□□ 0.84
MCFD2-212ENST00000444761 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
MCFD2-212ENST00000444761 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
MCFD2-212ENST00000444761 APLP2Q06481 763 aa20.15■□□□□ 0.82
MCFD2-212ENST00000444761 MYT1Q01538 1121 aa20.1■□□□□ 0.81
MCFD2-212ENST00000444761 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
MCFD2-212ENST00000444761 CENPBP07199 599 aaPredicted RBP20.03■□□□□ 0.8
MCFD2-212ENST00000444761 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
MCFD2-212ENST00000444761 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
MCFD2-212ENST00000444761 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
MCFD2-212ENST00000444761 TRIM26Q12899 539 aaPredicted RBP19.85■□□□□ 0.77
MCFD2-212ENST00000444761 CCER1Q8TC90 406 aaPredicted RBP19.8■□□□□ 0.76
MCFD2-212ENST00000444761 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
MCFD2-212ENST00000444761 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
MCFD2-212ENST00000444761 YTHDC1Q96MU7 727 aaKnown RBP19.72■□□□□ 0.75
MCFD2-212ENST00000444761 WIZO95785 1651 aa19.71■□□□□ 0.75
MCFD2-212ENST00000444761 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.74
MCFD2-212ENST00000444761 ITGAEP38570 1179 aa19.61■□□□□ 0.73
MCFD2-212ENST00000444761 HNRNPUL2Q1KMD3 747 aaKnown RBP19.61■□□□□ 0.73
MCFD2-212ENST00000444761 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
MCFD2-212ENST00000444761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.51■□□□□ 0.71
MCFD2-212ENST00000444761 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
MCFD2-212ENST00000444761 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
MCFD2-212ENST00000444761 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
MCFD2-212ENST00000444761 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
MCFD2-212ENST00000444761 GTF3C3Q9Y5Q9 886 aa19.41■□□□□ 0.7
MCFD2-212ENST00000444761 FBLN2P98095 1184 aa19.39■□□□□ 0.69
MCFD2-212ENST00000444761 SOGA1O94964 1423 aa19.38■□□□□ 0.69
MCFD2-212ENST00000444761 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
MCFD2-212ENST00000444761 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.69
MCFD2-212ENST00000444761 ARID3CA6NKF2 412 aa19.32■□□□□ 0.68
MCFD2-212ENST00000444761 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
MCFD2-212ENST00000444761 DIEXFQ68CQ4 756 aaKnown RBP19.3■□□□□ 0.68
MCFD2-212ENST00000444761 ACIN1Q9UKV3 1341 aaKnown RBP19.25■□□□□ 0.67
MCFD2-212ENST00000444761 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
MCFD2-212ENST00000444761 ERICH6Q7L0X2 663 aa19.23■□□□□ 0.67
MCFD2-212ENST00000444761 FAM50AQ14320 339 aaKnown RBP19.2■□□□□ 0.66
MCFD2-212ENST00000444761 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
MCFD2-212ENST00000444761 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
MCFD2-212ENST00000444761 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
MCFD2-212ENST00000444761 CLIP1P30622 1438 aa19.1■□□□□ 0.65
MCFD2-212ENST00000444761 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
MCFD2-212ENST00000444761 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
MCFD2-212ENST00000444761 NEUROD1Q13562 356 aa19.05■□□□□ 0.64
MCFD2-212ENST00000444761 EEA1Q15075 1411 aa19.05■□□□□ 0.64
MCFD2-212ENST00000444761 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
MCFD2-212ENST00000444761 UNC13AQ9UPW8 1703 aa19.02■□□□□ 0.64
MCFD2-212ENST00000444761 NEFLP07196 543 aa19.01■□□□□ 0.63
MCFD2-212ENST00000444761 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
MCFD2-212ENST00000444761 TNIKQ9UKE5 1360 aa19.01■□□□□ 0.63
MCFD2-212ENST00000444761 CADPSQ9ULU8 1353 aa19■□□□□ 0.63
MCFD2-212ENST00000444761 CUX2O14529 1486 aa18.98■□□□□ 0.63
MCFD2-212ENST00000444761 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
MCFD2-212ENST00000444761 NCAPD3P42695 1498 aa18.92■□□□□ 0.62
MCFD2-212ENST00000444761 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
MCFD2-212ENST00000444761 CHMP7Q8WUX9 453 aaPredicted RBP18.87■□□□□ 0.61
MCFD2-212ENST00000444761 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
MCFD2-212ENST00000444761 MYT1LQ9UL68 1186 aa18.85■□□□□ 0.61
MCFD2-212ENST00000444761 RAPGEF2Q9Y4G8 1499 aa18.83■□□□□ 0.6
MCFD2-212ENST00000444761 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
MCFD2-212ENST00000444761 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
MCFD2-212ENST00000444761 ZNF777Q9ULD5 760 aaPredicted RBP18.79■□□□□ 0.6
MCFD2-212ENST00000444761 NESP48681 1621 aa18.78■□□□□ 0.6
MCFD2-212ENST00000444761 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
MCFD2-212ENST00000444761 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
MCFD2-212ENST00000444761 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
MCFD2-212ENST00000444761 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
MCFD2-212ENST00000444761 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
MCFD2-212ENST00000444761 BCANQ96GW7 911 aa18.73■□□□□ 0.59
MCFD2-212ENST00000444761 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
MCFD2-212ENST00000444761 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
MCFD2-212ENST00000444761 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
MCFD2-212ENST00000444761 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
MCFD2-212ENST00000444761 MTUS2Q5JR59 1369 aa18.67■□□□□ 0.58
MCFD2-212ENST00000444761 CFTRP13569 1480 aa18.66■□□□□ 0.58
MCFD2-212ENST00000444761 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
MCFD2-212ENST00000444761 FGD5Q6ZNL6 1462 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms