RNA–Protein interactions for RNA: ENST00000521414.5

NDRG1-217, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 2,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-217ENST00000521414 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
NDRG1-217ENST00000521414 PELP1Q8IZL8 1130 aaKnown RBP26■■□□□ 1.75
NDRG1-217ENST00000521414 MYT1Q01538 1121 aa25.48■■□□□ 1.67
NDRG1-217ENST00000521414 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
NDRG1-217ENST00000521414 HRCP23327 699 aa24.83■■□□□ 1.56
NDRG1-217ENST00000521414 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
NDRG1-217ENST00000521414 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
NDRG1-217ENST00000521414 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
NDRG1-217ENST00000521414 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
NDRG1-217ENST00000521414 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
NDRG1-217ENST00000521414 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
NDRG1-217ENST00000521414 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.42
NDRG1-217ENST00000521414 ABCC9O60706 1549 aa23.64■■□□□ 1.37
NDRG1-217ENST00000521414 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.37
NDRG1-217ENST00000521414 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
NDRG1-217ENST00000521414 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
NDRG1-217ENST00000521414 NACADO15069 1562 aa23.37■■□□□ 1.33
NDRG1-217ENST00000521414 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
NDRG1-217ENST00000521414 PRKCSHP14314 528 aaPredicted RBP23.31■■□□□ 1.32
NDRG1-217ENST00000521414 BCL11AQ9H165 835 aa23.28■■□□□ 1.32
NDRG1-217ENST00000521414 ACIN1Q9UKV3 1341 aaKnown RBP23.19■■□□□ 1.3
NDRG1-217ENST00000521414 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
NDRG1-217ENST00000521414 CENPBP07199 599 aaPredicted RBP23.07■■□□□ 1.28
NDRG1-217ENST00000521414 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
NDRG1-217ENST00000521414 ERICH6Q7L0X2 663 aa23.04■■□□□ 1.28
NDRG1-217ENST00000521414 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
NDRG1-217ENST00000521414 GTF3C3Q9Y5Q9 886 aa22.95■■□□□ 1.26
NDRG1-217ENST00000521414 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
NDRG1-217ENST00000521414 APLP2Q06481 763 aa22.83■■□□□ 1.25
NDRG1-217ENST00000521414 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
NDRG1-217ENST00000521414 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.22
NDRG1-217ENST00000521414 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
NDRG1-217ENST00000521414 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
NDRG1-217ENST00000521414 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.22
NDRG1-217ENST00000521414 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.21
NDRG1-217ENST00000521414 ANP32EQ9BTT0 268 aa22.57■■□□□ 1.2
NDRG1-217ENST00000521414 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
NDRG1-217ENST00000521414 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
NDRG1-217ENST00000521414 WIZO95785 1651 aa22.43■■□□□ 1.18
NDRG1-217ENST00000521414 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.187e-17■□□□□ 9
NDRG1-217ENST00000521414 SMARCA4P51532 1647 aa22.34■■□□□ 1.17
NDRG1-217ENST00000521414 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
NDRG1-217ENST00000521414 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
NDRG1-217ENST00000521414 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.13
NDRG1-217ENST00000521414 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
NDRG1-217ENST00000521414 LOC105371045A0A1W2PR82 267 aa22.01■■□□□ 1.11
NDRG1-217ENST00000521414 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
NDRG1-217ENST00000521414 SMARCA2P51531 1590 aa21.98■■□□□ 1.11
NDRG1-217ENST00000521414 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
NDRG1-217ENST00000521414 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
NDRG1-217ENST00000521414 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
NDRG1-217ENST00000521414 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
NDRG1-217ENST00000521414 TSHZ2Q9NRE2 1034 aa21.85■■□□□ 1.09
NDRG1-217ENST00000521414 SLC24A1O60721 1099 aa21.8■■□□□ 1.08
NDRG1-217ENST00000521414 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
NDRG1-217ENST00000521414 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
NDRG1-217ENST00000521414 YTHDC1Q96MU7 727 aaKnown RBP21.63■■□□□ 1.05
NDRG1-217ENST00000521414 SUPT16HQ9Y5B9 1047 aaKnown RBP21.62■■□□□ 1.05
NDRG1-217ENST00000521414 ANO8Q9HCE9 1232 aaPredicted RBP21.61■■□□□ 1.05
NDRG1-217ENST00000521414 UBE2Q2Q8WVN8 375 aa21.6■■□□□ 1.05
NDRG1-217ENST00000521414 EHMT2Q96KQ7 1210 aa21.6■■□□□ 1.05
NDRG1-217ENST00000521414 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
NDRG1-217ENST00000521414 HMGXB3Q12766 1538 aa21.58■■□□□ 1.04
NDRG1-217ENST00000521414 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
NDRG1-217ENST00000521414 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
NDRG1-217ENST00000521414 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
NDRG1-217ENST00000521414 EIF5BO60841 1220 aaKnown RBP21.44■■□□□ 1.02
NDRG1-217ENST00000521414 ZNF316A6NFI3 1004 aaPredicted RBP21.43■■□□□ 1.02
NDRG1-217ENST00000521414 ERICH6BQ5W0A0 696 aa21.36■■□□□ 1.01
NDRG1-217ENST00000521414 DAXXQ9UER7 740 aaPredicted RBP21.36■■□□□ 1.01
NDRG1-217ENST00000521414 SOGA1O94964 1423 aa21.36■■□□□ 1.01
NDRG1-217ENST00000521414 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
NDRG1-217ENST00000521414 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
NDRG1-217ENST00000521414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
NDRG1-217ENST00000521414 MIER1Q8N108 512 aa21.34■■□□□ 1.01
NDRG1-217ENST00000521414 EEA1Q15075 1411 aa21.3■■□□□ 1
NDRG1-217ENST00000521414 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
NDRG1-217ENST00000521414 CFTRP13569 1480 aa21.24■□□□□ 0.99
NDRG1-217ENST00000521414 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
NDRG1-217ENST00000521414 RBM19Q9Y4C8 960 aaKnown RBP21.23■□□□□ 0.99
NDRG1-217ENST00000521414 TOP2BQ02880 1626 aa21.2■□□□□ 0.98
NDRG1-217ENST00000521414 BIVM-ERCC5R4GMW8 1640 aa21.16■□□□□ 0.98
NDRG1-217ENST00000521414 DEKP35659 375 aaKnown RBP21.14■□□□□ 0.97
NDRG1-217ENST00000521414 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
NDRG1-217ENST00000521414 MSH5O43196 834 aa21.11■□□□□ 0.97
NDRG1-217ENST00000521414 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
NDRG1-217ENST00000521414 CUX1P39880 1505 aa21.08■□□□□ 0.97
NDRG1-217ENST00000521414 TNIKQ9UKE5 1360 aa21.08■□□□□ 0.96
NDRG1-217ENST00000521414 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
NDRG1-217ENST00000521414 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
NDRG1-217ENST00000521414 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
NDRG1-217ENST00000521414 CEP164Q9UPV0 1460 aa21.03■□□□□ 0.96
NDRG1-217ENST00000521414 CCDC136Q96JN2 1154 aa21.03■□□□□ 0.96
NDRG1-217ENST00000521414 KIF21BO75037 1637 aa21.02■□□□□ 0.96
NDRG1-217ENST00000521414 FANCIQ9NVI1 1328 aa21.02■□□□□ 0.96
NDRG1-217ENST00000521414 PKNOX2Q96KN3 472 aa20.99■□□□□ 0.95
NDRG1-217ENST00000521414 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.94
NDRG1-217ENST00000521414 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.93
NDRG1-217ENST00000521414 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
NDRG1-217ENST00000521414 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms