RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 NISCHQ9Y2I1 1504 aa38.13■■■■□ 3.69
CCDC57-215ENST00000582100 CCDC180Q9P1Z9 1646 aa34.1■■■■□ 3.05
CCDC57-215ENST00000582100 ABCC9O60706 1549 aa33.84■■■■□ 3.01
CCDC57-215ENST00000582100 RB1CC1Q8TDY2 1594 aa32.35■■■□□ 2.77
CCDC57-215ENST00000582100 NACADO15069 1562 aa32.21■■■□□ 2.75
CCDC57-215ENST00000582100 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
CCDC57-215ENST00000582100 MYO15BQ96JP2 1530 aa31.88■■■□□ 2.69
CCDC57-215ENST00000582100 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
CCDC57-215ENST00000582100 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
CCDC57-215ENST00000582100 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
CCDC57-215ENST00000582100 DNAJC5BQ9UF47 199 aa31.56■■■□□ 2.64
CCDC57-215ENST00000582100 DCAF1Q9Y4B6 1507 aa31.54■■■□□ 2.64
CCDC57-215ENST00000582100 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.61
CCDC57-215ENST00000582100 SCRIBQ14160 1630 aa31.05■■■□□ 2.56
CCDC57-215ENST00000582100 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
CCDC57-215ENST00000582100 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
CCDC57-215ENST00000582100 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
CCDC57-215ENST00000582100 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
CCDC57-215ENST00000582100 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
CCDC57-215ENST00000582100 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
CCDC57-215ENST00000582100 ATAD2BQ9ULI0 1458 aa29.67■■■□□ 2.34
CCDC57-215ENST00000582100 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
CCDC57-215ENST00000582100 BAZ1AQ9NRL2 1556 aaPredicted RBP29.58■■■□□ 2.33
CCDC57-215ENST00000582100 HMGXB3Q12766 1538 aa29.52■■■□□ 2.32
CCDC57-215ENST00000582100 PEG3Q9GZU2 1588 aa29.42■■■□□ 2.3
CCDC57-215ENST00000582100 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
CCDC57-215ENST00000582100 MROH2BQ7Z745 1585 aa29.36■■■□□ 2.29
CCDC57-215ENST00000582100 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
CCDC57-215ENST00000582100 NESP48681 1621 aa29.14■■■□□ 2.26
CCDC57-215ENST00000582100 CUX2O14529 1486 aa29.11■■■□□ 2.25
CCDC57-215ENST00000582100 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.24
CCDC57-215ENST00000582100 WIZO95785 1651 aa29.01■■■□□ 2.23
CCDC57-215ENST00000582100 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
CCDC57-215ENST00000582100 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
CCDC57-215ENST00000582100 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
CCDC57-215ENST00000582100 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
CCDC57-215ENST00000582100 THOC2Q8NI27 1593 aaKnown RBP28.79■■■□□ 2.2
CCDC57-215ENST00000582100 KIF21AQ7Z4S6 1674 aa28.76■■■□□ 2.19
CCDC57-215ENST00000582100 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
CCDC57-215ENST00000582100 CFTRP13569 1480 aa28.56■■■□□ 2.16
CCDC57-215ENST00000582100 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
CCDC57-215ENST00000582100 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
CCDC57-215ENST00000582100 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
CCDC57-215ENST00000582100 WDR62O43379 1518 aa28.48■■■□□ 2.15
CCDC57-215ENST00000582100 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
CCDC57-215ENST00000582100 PRDM2Q13029 1718 aa28.25■■■□□ 2.11
CCDC57-215ENST00000582100 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
CCDC57-215ENST00000582100 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
CCDC57-215ENST00000582100 TOPBP1Q92547 1522 aa27.97■■■□□ 2.07
CCDC57-215ENST00000582100 IFT140Q96RY7 1462 aa27.94■■■□□ 2.06
CCDC57-215ENST00000582100 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
CCDC57-215ENST00000582100 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
CCDC57-215ENST00000582100 ZNF608Q9ULD9 1512 aaPredicted RBP27.83■■■□□ 2.05
CCDC57-215ENST00000582100 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
CCDC57-215ENST00000582100 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
CCDC57-215ENST00000582100 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.03
CCDC57-215ENST00000582100 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
CCDC57-215ENST00000582100 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.01
CCDC57-215ENST00000582100 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
CCDC57-215ENST00000582100 SOGA1O94964 1423 aa27.6■■■□□ 2.01
CCDC57-215ENST00000582100 RAD54L2Q9Y4B4 1467 aa27.59■■■□□ 2.01
CCDC57-215ENST00000582100 CUX1P39880 1505 aa27.57■■■□□ 2
CCDC57-215ENST00000582100 FGD5Q6ZNL6 1462 aa27.56■■■□□ 2
CCDC57-215ENST00000582100 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
CCDC57-215ENST00000582100 WDR97A6NE52 1622 aa27.48■■□□□ 1.99
CCDC57-215ENST00000582100 CHD1O14646 1710 aa27.42■■□□□ 1.98
CCDC57-215ENST00000582100 RIMBP3CA6NJZ7 1639 aa27.39■■□□□ 1.98
CCDC57-215ENST00000582100 RIMBP3BA6NNM3 1639 aa27.39■■□□□ 1.98
CCDC57-215ENST00000582100 RIMBP3Q9UFD9 1639 aa27.39■■□□□ 1.98
CCDC57-215ENST00000582100 FBLN2P98095 1184 aa27.39■■□□□ 1.98
CCDC57-215ENST00000582100 ARHGEF11O15085 1522 aa27.35■■□□□ 1.97
CCDC57-215ENST00000582100 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
CCDC57-215ENST00000582100 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
CCDC57-215ENST00000582100 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
CCDC57-215ENST00000582100 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
CCDC57-215ENST00000582100 GAPVD1Q14C86 1478 aa27.27■■□□□ 1.96
CCDC57-215ENST00000582100 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
CCDC57-215ENST00000582100 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
CCDC57-215ENST00000582100 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
CCDC57-215ENST00000582100 TOP2BQ02880 1626 aa27.21■■□□□ 1.95
CCDC57-215ENST00000582100 BIVM-ERCC5R4GMW8 1640 aa27.2■■□□□ 1.95
CCDC57-215ENST00000582100 PBRM1Q86U86 1689 aa27.2■■□□□ 1.94
CCDC57-215ENST00000582100 ABCA5Q8WWZ7 1642 aa27.19■■□□□ 1.94
CCDC57-215ENST00000582100 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
CCDC57-215ENST00000582100 CYB5RLQ6IPT4 315 aa27.15■■□□□ 1.94
CCDC57-215ENST00000582100 CLASP1Q7Z460 1538 aa27.15■■□□□ 1.94
CCDC57-215ENST00000582100 ARAP1Q96P48 1450 aa27.09■■□□□ 1.93
CCDC57-215ENST00000582100 GRIN2AQ12879 1464 aa26.97■■□□□ 1.91
CCDC57-215ENST00000582100 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
CCDC57-215ENST00000582100 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.91
CCDC57-215ENST00000582100 FHAD1B1AJZ9 1412 aa26.94■■□□□ 1.9
CCDC57-215ENST00000582100 NUP160Q12769 1436 aa26.89■■□□□ 1.89
CCDC57-215ENST00000582100 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
CCDC57-215ENST00000582100 TRHP20396 242 aaPredicted RBP26.75■■□□□ 1.87
CCDC57-215ENST00000582100 SHROOM2Q13796 1616 aa26.72■■□□□ 1.87
CCDC57-215ENST00000582100 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
CCDC57-215ENST00000582100 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
CCDC57-215ENST00000582100 IGF1RP08069 1367 aa26.68■■□□□ 1.86
CCDC57-215ENST00000582100 JPH4Q96JJ6 628 aa26.63■■□□□ 1.85
CCDC57-215ENST00000582100 PRG4Q92954 1404 aaPredicted RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms