RNA–Protein interactions for RNA: ENST00000521026.5

NDRG1-216, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 2,145 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-216ENST00000521026 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.4
NDRG1-216ENST00000521026 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
NDRG1-216ENST00000521026 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
NDRG1-216ENST00000521026 SHROOM4Q9ULL8 1493 aa25.3■■□□□ 1.64
NDRG1-216ENST00000521026 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
NDRG1-216ENST00000521026 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
NDRG1-216ENST00000521026 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
NDRG1-216ENST00000521026 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
NDRG1-216ENST00000521026 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
NDRG1-216ENST00000521026 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
NDRG1-216ENST00000521026 ABCC9O60706 1549 aa23.92■■□□□ 1.42
NDRG1-216ENST00000521026 NACADO15069 1562 aa23.78■■□□□ 1.4
NDRG1-216ENST00000521026 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
NDRG1-216ENST00000521026 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
NDRG1-216ENST00000521026 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
NDRG1-216ENST00000521026 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
NDRG1-216ENST00000521026 WIZO95785 1651 aa23.21■■□□□ 1.31
NDRG1-216ENST00000521026 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
NDRG1-216ENST00000521026 LOC105371045A0A1W2PR82 267 aa23.17■■□□□ 1.3
NDRG1-216ENST00000521026 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
NDRG1-216ENST00000521026 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
NDRG1-216ENST00000521026 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
NDRG1-216ENST00000521026 PCGF6Q9BYE7 350 aa22.91■■□□□ 1.26
NDRG1-216ENST00000521026 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
NDRG1-216ENST00000521026 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
NDRG1-216ENST00000521026 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
NDRG1-216ENST00000521026 HRCP23327 699 aa22.79■■□□□ 1.24
NDRG1-216ENST00000521026 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
NDRG1-216ENST00000521026 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
NDRG1-216ENST00000521026 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.237e-17■□□□□ 9
NDRG1-216ENST00000521026 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
NDRG1-216ENST00000521026 EHMT2Q96KQ7 1210 aa22.58■■□□□ 1.2
NDRG1-216ENST00000521026 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
NDRG1-216ENST00000521026 ABCC8Q09428 1581 aa22.57■■□□□ 1.2
NDRG1-216ENST00000521026 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
NDRG1-216ENST00000521026 ATAD2BQ9ULI0 1458 aa22.35■■□□□ 1.17
NDRG1-216ENST00000521026 PPARGC1BQ86YN6 1023 aaKnown RBP22.33■■□□□ 1.16
NDRG1-216ENST00000521026 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
NDRG1-216ENST00000521026 SOGA1O94964 1423 aa22.27■■□□□ 1.16
NDRG1-216ENST00000521026 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
NDRG1-216ENST00000521026 RUSC2Q8N2Y8 1516 aa22.19■■□□□ 1.14
NDRG1-216ENST00000521026 EEA1Q15075 1411 aa22.17■■□□□ 1.14
NDRG1-216ENST00000521026 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
NDRG1-216ENST00000521026 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
NDRG1-216ENST00000521026 CEP162Q5TB80 1403 aa22.07■■□□□ 1.12
NDRG1-216ENST00000521026 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
NDRG1-216ENST00000521026 GOLGA3Q08378 1498 aa22■■□□□ 1.11
NDRG1-216ENST00000521026 HMGXB3Q12766 1538 aa21.99■■□□□ 1.11
NDRG1-216ENST00000521026 ZEB1P37275 1124 aaPredicted RBP21.98■■□□□ 1.11
NDRG1-216ENST00000521026 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
NDRG1-216ENST00000521026 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
NDRG1-216ENST00000521026 KIF21BO75037 1637 aa21.93■■□□□ 1.1
NDRG1-216ENST00000521026 TOP2BQ02880 1626 aa21.92■■□□□ 1.1
NDRG1-216ENST00000521026 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
NDRG1-216ENST00000521026 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
NDRG1-216ENST00000521026 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
NDRG1-216ENST00000521026 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
NDRG1-216ENST00000521026 CUX1P39880 1505 aa21.73■■□□□ 1.07
NDRG1-216ENST00000521026 CFTRP13569 1480 aa21.72■■□□□ 1.07
NDRG1-216ENST00000521026 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
NDRG1-216ENST00000521026 CLIP1P30622 1438 aa21.7■■□□□ 1.07
NDRG1-216ENST00000521026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
NDRG1-216ENST00000521026 CCER1Q8TC90 406 aaPredicted RBP21.62■■□□□ 1.05
NDRG1-216ENST00000521026 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
NDRG1-216ENST00000521026 VPS8Q8N3P4 1428 aa21.6■■□□□ 1.05
NDRG1-216ENST00000521026 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
NDRG1-216ENST00000521026 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
NDRG1-216ENST00000521026 RANGAP1P46060 587 aaPredicted RBP21.54■■□□□ 1.04
NDRG1-216ENST00000521026 KIF27Q86VH2 1401 aa21.53■■□□□ 1.04
NDRG1-216ENST00000521026 CADPSQ9ULU8 1353 aa21.49■■□□□ 1.03
NDRG1-216ENST00000521026 ARAP1Q96P48 1450 aa21.43■■□□□ 1.02
NDRG1-216ENST00000521026 APLP2Q06481 763 aa21.42■■□□□ 1.02
NDRG1-216ENST00000521026 CUX2O14529 1486 aa21.37■■□□□ 1.01
NDRG1-216ENST00000521026 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
NDRG1-216ENST00000521026 HNRNPUL2Q1KMD3 747 aaKnown RBP21.33■■□□□ 1.01
NDRG1-216ENST00000521026 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
NDRG1-216ENST00000521026 IGF1RP08069 1367 aa21.3■■□□□ 1
NDRG1-216ENST00000521026 ARHGAP35Q9NRY4 1499 aa21.27■■□□□ 1
NDRG1-216ENST00000521026 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
NDRG1-216ENST00000521026 NESP48681 1621 aa21.22■□□□□ 0.99
NDRG1-216ENST00000521026 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
NDRG1-216ENST00000521026 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
NDRG1-216ENST00000521026 TOPBP1Q92547 1522 aa21.17■□□□□ 0.98
NDRG1-216ENST00000521026 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
NDRG1-216ENST00000521026 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
NDRG1-216ENST00000521026 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
NDRG1-216ENST00000521026 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
NDRG1-216ENST00000521026 RRBP1Q9P2E9 1410 aaKnown RBP21.08■□□□□ 0.96
NDRG1-216ENST00000521026 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
NDRG1-216ENST00000521026 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
NDRG1-216ENST00000521026 TIAM1Q13009 1591 aa21.04■□□□□ 0.96
NDRG1-216ENST00000521026 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
NDRG1-216ENST00000521026 CUL7Q14999 1698 aa21.03■□□□□ 0.96
NDRG1-216ENST00000521026 ZNF316A6NFI3 1004 aaPredicted RBP21■□□□□ 0.95
NDRG1-216ENST00000521026 MAP3K1Q13233 1512 aa21■□□□□ 0.95
NDRG1-216ENST00000521026 CTTNBP2Q8WZ74 1663 aa20.99■□□□□ 0.95
NDRG1-216ENST00000521026 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
NDRG1-216ENST00000521026 PCF11O94913 1555 aaKnown RBP20.96■□□□□ 0.95
NDRG1-216ENST00000521026 KIF21AQ7Z4S6 1674 aa20.95■□□□□ 0.94
NDRG1-216ENST00000521026 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms