Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC33.07■■■□□ 2.89
ABCA3Q99758 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC33.07■■■□□ 2.89
ABCA3Q99758 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
ABCA3Q99758 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
ABCA3Q99758 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
ABCA3Q99758 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
ABCA3Q99758 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
ABCA3Q99758 AC022616.5-201ENST00000518796 181 ntBASIC33.07■■■□□ 2.88
ABCA3Q99758 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
ABCA3Q99758 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA3Q99758 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA3Q99758 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA3Q99758 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
ABCA3Q99758 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
ABCA3Q99758 RALB-208ENST00000631312 311 ntTSL 5 BASIC33.05■■■□□ 2.88
ABCA3Q99758 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC33.05■■■□□ 2.88
ABCA3Q99758 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ABCA3Q99758 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC33.04■■■□□ 2.88
ABCA3Q99758 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA3Q99758 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA3Q99758 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA3Q99758 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA3Q99758 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA3Q99758 AC110285.6-201ENST00000617652 491 ntBASIC33.04■■■□□ 2.88
ABCA3Q99758 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
ABCA3Q99758 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC33.03■■■□□ 2.88
ABCA3Q99758 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
ABCA3Q99758 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC33.02■■■□□ 2.88
ABCA3Q99758 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
ABCA3Q99758 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
ABCA3Q99758 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC33.02■■■□□ 2.88
ABCA3Q99758 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC33.02■■■□□ 2.88
ABCA3Q99758 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC33.02■■■□□ 2.88
ABCA3Q99758 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC33.02■■■□□ 2.88
ABCA3Q99758 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC33.01■■■□□ 2.87
ABCA3Q99758 AL139246.5-201ENST00000606645 996 ntBASIC33.01■■■□□ 2.87
ABCA3Q99758 AC137630.3-201ENST00000607245 391 ntBASIC33.01■■■□□ 2.87
ABCA3Q99758 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ABCA3Q99758 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ABCA3Q99758 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC33.01■■■□□ 2.87
ABCA3Q99758 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC33■■■□□ 2.87
ABCA3Q99758 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
ABCA3Q99758 AC021242.3-201ENST00000607598 1377 ntBASIC32.99■■■□□ 2.87
ABCA3Q99758 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
ABCA3Q99758 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC32.99■■■□□ 2.87
ABCA3Q99758 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
ABCA3Q99758 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
ABCA3Q99758 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC32.98■■■□□ 2.87
ABCA3Q99758 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.98■■■□□ 2.87
ABCA3Q99758 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.98■■■□□ 2.87
ABCA3Q99758 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
ABCA3Q99758 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC32.97■■■□□ 2.87
ABCA3Q99758 MIR4281-201ENST00000580852 62 ntBASIC32.97■■■□□ 2.87
ABCA3Q99758 AL117332.1-201ENST00000622628 974 ntBASIC32.97■■■□□ 2.87
ABCA3Q99758 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
ABCA3Q99758 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.97■■■□□ 2.87
ABCA3Q99758 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.97■■■□□ 2.87
ABCA3Q99758 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.97■■■□□ 2.87
ABCA3Q99758 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC32.97■■■□□ 2.87
ABCA3Q99758 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC32.97■■■□□ 2.87
ABCA3Q99758 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.96■■■□□ 2.87
ABCA3Q99758 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
ABCA3Q99758 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
ABCA3Q99758 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
ABCA3Q99758 KRT18P24-201ENST00000344739 1156 ntBASIC32.94■■■□□ 2.86
ABCA3Q99758 TSPY9P-201ENST00000440215 945 ntBASIC32.94■■■□□ 2.86
ABCA3Q99758 TSPY11P-201ENST00000442607 1045 ntBASIC32.94■■■□□ 2.86
ABCA3Q99758 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
ABCA3Q99758 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
ABCA3Q99758 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
ABCA3Q99758 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
ABCA3Q99758 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC32.94■■■□□ 2.86
ABCA3Q99758 NALT1-201ENST00000429224 738 ntTSL 5 BASIC32.94■■■□□ 2.86
ABCA3Q99758 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
ABCA3Q99758 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.93■■■□□ 2.86
ABCA3Q99758 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
ABCA3Q99758 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.92■■■□□ 2.86
ABCA3Q99758 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
ABCA3Q99758 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
ABCA3Q99758 SRR-208ENST00000576848 588 ntTSL 4 BASIC32.91■■■□□ 2.86
ABCA3Q99758 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC32.91■■■□□ 2.86
ABCA3Q99758 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC32.91■■■□□ 2.86
ABCA3Q99758 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC32.91■■■□□ 2.86
ABCA3Q99758 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.91■■■□□ 2.86
ABCA3Q99758 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
ABCA3Q99758 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC32.9■■■□□ 2.86
ABCA3Q99758 AL136116.3-201ENST00000402907 1138 ntBASIC32.9■■■□□ 2.86
ABCA3Q99758 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC32.89■■■□□ 2.86
ABCA3Q99758 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC32.89■■■□□ 2.86
ABCA3Q99758 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
ABCA3Q99758 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC32.89■■■□□ 2.86
ABCA3Q99758 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC32.88■■■□□ 2.85
ABCA3Q99758 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.87■■■□□ 2.85
ABCA3Q99758 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
ABCA3Q99758 RPP21-222ENST00000433076 577 ntTSL 2 BASIC32.86■■■□□ 2.85
ABCA3Q99758 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.86■■■□□ 2.85
ABCA3Q99758 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC32.85■■■□□ 2.85
ABCA3Q99758 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
ABCA3Q99758 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
ABCA3Q99758 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC32.85■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms