Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
MS4A4EQ96PG1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.6■■□□□ 1.21
MS4A4EQ96PG1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
MS4A4EQ96PG1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.6■■□□□ 1.21
MS4A4EQ96PG1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 ECEL1P2-201ENST00000461596 1295 ntBASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 MIR3960-201ENST00000583311 91 ntBASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 SMPD5-203ENST00000639008 1464 ntBASIC22.59■■□□□ 1.21
MS4A4EQ96PG1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MS4A4EQ96PG1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MS4A4EQ96PG1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MS4A4EQ96PG1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.58■■□□□ 1.21
MS4A4EQ96PG1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MS4A4EQ96PG1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.58■■□□□ 1.2
MS4A4EQ96PG1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
MS4A4EQ96PG1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
MS4A4EQ96PG1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
MS4A4EQ96PG1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MS4A4EQ96PG1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MS4A4EQ96PG1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MS4A4EQ96PG1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MS4A4EQ96PG1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
MS4A4EQ96PG1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.56■■□□□ 1.2
MS4A4EQ96PG1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
MS4A4EQ96PG1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
MS4A4EQ96PG1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.55■■□□□ 1.2
MS4A4EQ96PG1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.55■■□□□ 1.2
MS4A4EQ96PG1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MS4A4EQ96PG1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MS4A4EQ96PG1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.55■■□□□ 1.2
MS4A4EQ96PG1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MS4A4EQ96PG1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MS4A4EQ96PG1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MS4A4EQ96PG1 GPX1-201ENST00000419349 1106 ntBASIC22.54■■□□□ 1.2
MS4A4EQ96PG1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MS4A4EQ96PG1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.54■■□□□ 1.2
MS4A4EQ96PG1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
MS4A4EQ96PG1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
MS4A4EQ96PG1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MS4A4EQ96PG1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MS4A4EQ96PG1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.53■■□□□ 1.2
MS4A4EQ96PG1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.53■■□□□ 1.2
MS4A4EQ96PG1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
MS4A4EQ96PG1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MS4A4EQ96PG1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.52■■□□□ 1.2
MS4A4EQ96PG1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MS4A4EQ96PG1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.52■■□□□ 1.2
MS4A4EQ96PG1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MS4A4EQ96PG1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MS4A4EQ96PG1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.51■■□□□ 1.19
MS4A4EQ96PG1 AC096887.2-201ENST00000623443 1957 ntBASIC22.51■■□□□ 1.19
MS4A4EQ96PG1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.51■■□□□ 1.19
MS4A4EQ96PG1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
MS4A4EQ96PG1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
MS4A4EQ96PG1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
MS4A4EQ96PG1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MS4A4EQ96PG1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MS4A4EQ96PG1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MS4A4EQ96PG1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MS4A4EQ96PG1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
MS4A4EQ96PG1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.49■■□□□ 1.19
MS4A4EQ96PG1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
MS4A4EQ96PG1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MS4A4EQ96PG1 RP9P-202ENST00000450133 1212 ntBASIC22.48■■□□□ 1.19
MS4A4EQ96PG1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.48■■□□□ 1.19
MS4A4EQ96PG1 AC007029.1-201ENST00000604183 313 ntBASIC22.48■■□□□ 1.19
MS4A4EQ96PG1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MS4A4EQ96PG1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MS4A4EQ96PG1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.47■■□□□ 1.19
MS4A4EQ96PG1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.47■■□□□ 1.19
MS4A4EQ96PG1 AC020928.2-201ENST00000588717 2197 ntBASIC22.47■■□□□ 1.19
MS4A4EQ96PG1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MS4A4EQ96PG1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.47■■□□□ 1.19
MS4A4EQ96PG1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
MS4A4EQ96PG1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.46■■□□□ 1.19
MS4A4EQ96PG1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
MS4A4EQ96PG1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.46■■□□□ 1.19
MS4A4EQ96PG1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.46■■□□□ 1.19
MS4A4EQ96PG1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
MS4A4EQ96PG1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MS4A4EQ96PG1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
MS4A4EQ96PG1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
MS4A4EQ96PG1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A4EQ96PG1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms