Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NCLNQ969V3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCLNQ969V3 AC060814.1-201ENST00000554326 538 ntBASIC23.24■■□□□ 1.31
NCLNQ969V3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.24■■□□□ 1.31
NCLNQ969V3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCLNQ969V3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
NCLNQ969V3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCLNQ969V3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
NCLNQ969V3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCLNQ969V3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NCLNQ969V3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.23■■□□□ 1.31
NCLNQ969V3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.23■■□□□ 1.31
NCLNQ969V3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.23■■□□□ 1.31
NCLNQ969V3 AC126177.7-201ENST00000547904 679 ntBASIC23.23■■□□□ 1.31
NCLNQ969V3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
NCLNQ969V3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NCLNQ969V3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCLNQ969V3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.22■■□□□ 1.31
NCLNQ969V3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NCLNQ969V3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.22■■□□□ 1.31
NCLNQ969V3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NCLNQ969V3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NCLNQ969V3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLNQ969V3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.21■■□□□ 1.31
NCLNQ969V3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.21■■□□□ 1.31
NCLNQ969V3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.21■■□□□ 1.31
NCLNQ969V3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.21■■□□□ 1.31
NCLNQ969V3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLNQ969V3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
NCLNQ969V3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.21■■□□□ 1.31
NCLNQ969V3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCLNQ969V3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
NCLNQ969V3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCLNQ969V3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCLNQ969V3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NCLNQ969V3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCLNQ969V3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLNQ969V3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.19■■□□□ 1.3
NCLNQ969V3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLNQ969V3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLNQ969V3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
NCLNQ969V3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NCLNQ969V3 AL359258.2-201ENST00000564063 1566 ntBASIC23.18■■□□□ 1.3
NCLNQ969V3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLNQ969V3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLNQ969V3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.18■■□□□ 1.3
NCLNQ969V3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
NCLNQ969V3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLNQ969V3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLNQ969V3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLNQ969V3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NCLNQ969V3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLNQ969V3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NCLNQ969V3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NCLNQ969V3 AC142472.1-201ENST00000612013 1741 ntBASIC23.16■■□□□ 1.3
NCLNQ969V3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
NCLNQ969V3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCLNQ969V3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCLNQ969V3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCLNQ969V3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCLNQ969V3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLNQ969V3 RNF126P1-201ENST00000567452 1320 ntBASIC23.15■■□□□ 1.3
NCLNQ969V3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NCLNQ969V3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.15■■□□□ 1.3
NCLNQ969V3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLNQ969V3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NCLNQ969V3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NCLNQ969V3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NCLNQ969V3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.14■■□□□ 1.29
NCLNQ969V3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.14■■□□□ 1.29
NCLNQ969V3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLNQ969V3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLNQ969V3 RARRES2P2-201ENST00000394842 485 ntBASIC23.13■■□□□ 1.29
NCLNQ969V3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLNQ969V3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLNQ969V3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCLNQ969V3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCLNQ969V3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCLNQ969V3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NCLNQ969V3 AC092296.2-201ENST00000589470 999 ntBASIC23.11■■□□□ 1.29
NCLNQ969V3 WHAMMP3-201ENST00000611636 1609 ntBASIC23.11■■□□□ 1.29
NCLNQ969V3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
NCLNQ969V3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLNQ969V3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NCLNQ969V3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
NCLNQ969V3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.1■■□□□ 1.29
NCLNQ969V3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCLNQ969V3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLNQ969V3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NCLNQ969V3 AL157400.5-201ENST00000507624 621 ntBASIC23.09■■□□□ 1.29
NCLNQ969V3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.09■■□□□ 1.29
NCLNQ969V3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NCLNQ969V3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NCLNQ969V3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NCLNQ969V3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.08■■□□□ 1.29
NCLNQ969V3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NCLNQ969V3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NCLNQ969V3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NCLNQ969V3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
NCLNQ969V3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms