Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
SIX5Q8N196 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.97■■□□□ 1.59
SIX5Q8N196 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SIX5Q8N196 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SIX5Q8N196 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.97■■□□□ 1.59
SIX5Q8N196 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SIX5Q8N196 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SIX5Q8N196 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SIX5Q8N196 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.96■■□□□ 1.59
SIX5Q8N196 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.96■■□□□ 1.59
SIX5Q8N196 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.96■■□□□ 1.59
SIX5Q8N196 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SIX5Q8N196 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SIX5Q8N196 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.95■■□□□ 1.58
SIX5Q8N196 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SIX5Q8N196 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SIX5Q8N196 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SIX5Q8N196 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
SIX5Q8N196 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SIX5Q8N196 WHAMMP3-201ENST00000611636 1609 ntBASIC24.94■■□□□ 1.58
SIX5Q8N196 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SIX5Q8N196 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SIX5Q8N196 AC022616.5-201ENST00000518796 181 ntBASIC24.94■■□□□ 1.58
SIX5Q8N196 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.94■■□□□ 1.58
SIX5Q8N196 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
SIX5Q8N196 AL139393.2-201ENST00000608721 2025 ntBASIC24.93■■□□□ 1.58
SIX5Q8N196 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.93■■□□□ 1.58
SIX5Q8N196 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.93■■□□□ 1.58
SIX5Q8N196 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.93■■□□□ 1.58
SIX5Q8N196 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SIX5Q8N196 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SIX5Q8N196 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.92■■□□□ 1.58
SIX5Q8N196 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SIX5Q8N196 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
SIX5Q8N196 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SIX5Q8N196 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SIX5Q8N196 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
SIX5Q8N196 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.91■■□□□ 1.58
SIX5Q8N196 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SIX5Q8N196 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
SIX5Q8N196 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SIX5Q8N196 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SIX5Q8N196 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.9■■□□□ 1.58
SIX5Q8N196 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.9■■□□□ 1.58
SIX5Q8N196 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SIX5Q8N196 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.89■■□□□ 1.58
SIX5Q8N196 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SIX5Q8N196 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.58
SIX5Q8N196 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SIX5Q8N196 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.89■■□□□ 1.58
SIX5Q8N196 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.89■■□□□ 1.58
SIX5Q8N196 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.89■■□□□ 1.57
SIX5Q8N196 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SIX5Q8N196 KRT18P24-201ENST00000344739 1156 ntBASIC24.88■■□□□ 1.57
SIX5Q8N196 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.88■■□□□ 1.57
SIX5Q8N196 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.88■■□□□ 1.57
SIX5Q8N196 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.88■■□□□ 1.57
SIX5Q8N196 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.88■■□□□ 1.57
SIX5Q8N196 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.88■■□□□ 1.57
SIX5Q8N196 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.88■■□□□ 1.57
SIX5Q8N196 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SIX5Q8N196 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SIX5Q8N196 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SIX5Q8N196 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.87■■□□□ 1.57
SIX5Q8N196 AC131281.2-201ENST00000520478 145 ntBASIC24.87■■□□□ 1.57
SIX5Q8N196 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.87■■□□□ 1.57
SIX5Q8N196 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SIX5Q8N196 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.87■■□□□ 1.57
SIX5Q8N196 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SIX5Q8N196 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SIX5Q8N196 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SIX5Q8N196 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.86■■□□□ 1.57
SIX5Q8N196 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
SIX5Q8N196 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SIX5Q8N196 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.85■■□□□ 1.57
SIX5Q8N196 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.85■■□□□ 1.57
SIX5Q8N196 AC137630.3-201ENST00000607245 391 ntBASIC24.85■■□□□ 1.57
SIX5Q8N196 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SIX5Q8N196 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.85■■□□□ 1.57
SIX5Q8N196 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SIX5Q8N196 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SIX5Q8N196 AL136116.3-201ENST00000402907 1138 ntBASIC24.84■■□□□ 1.57
SIX5Q8N196 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.84■■□□□ 1.57
SIX5Q8N196 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.84■■□□□ 1.57
SIX5Q8N196 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SIX5Q8N196 AC021242.3-201ENST00000607598 1377 ntBASIC24.83■■□□□ 1.57
SIX5Q8N196 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.83■■□□□ 1.57
SIX5Q8N196 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
SIX5Q8N196 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
SIX5Q8N196 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SIX5Q8N196 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SIX5Q8N196 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.82■■□□□ 1.56
SIX5Q8N196 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.82■■□□□ 1.56
SIX5Q8N196 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.82■■□□□ 1.56
SIX5Q8N196 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
SIX5Q8N196 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.81■■□□□ 1.56
SIX5Q8N196 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
SIX5Q8N196 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.81■■□□□ 1.56
SIX5Q8N196 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.81■■□□□ 1.56
SIX5Q8N196 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms