Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
RC3H1Q5TC82 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RC3H1Q5TC82 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
RC3H1Q5TC82 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.14■■■□□ 2.58
RC3H1Q5TC82 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.14■■■□□ 2.58
RC3H1Q5TC82 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.14■■■□□ 2.58
RC3H1Q5TC82 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
RC3H1Q5TC82 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
RC3H1Q5TC82 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
RC3H1Q5TC82 BX664725.1-201ENST00000438252 379 ntBASIC31.13■■■□□ 2.57
RC3H1Q5TC82 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.13■■■□□ 2.57
RC3H1Q5TC82 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RC3H1Q5TC82 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RC3H1Q5TC82 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
RC3H1Q5TC82 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
RC3H1Q5TC82 KRT18P24-201ENST00000344739 1156 ntBASIC31.12■■■□□ 2.57
RC3H1Q5TC82 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.12■■■□□ 2.57
RC3H1Q5TC82 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RC3H1Q5TC82 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RC3H1Q5TC82 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RC3H1Q5TC82 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RC3H1Q5TC82 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RC3H1Q5TC82 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
RC3H1Q5TC82 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.11■■■□□ 2.57
RC3H1Q5TC82 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.1■■■□□ 2.57
RC3H1Q5TC82 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RC3H1Q5TC82 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.1■■■□□ 2.57
RC3H1Q5TC82 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.1■■■□□ 2.57
RC3H1Q5TC82 UNC93B8-201ENST00000511903 705 ntBASIC31.1■■■□□ 2.57
RC3H1Q5TC82 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RC3H1Q5TC82 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.09■■■□□ 2.57
RC3H1Q5TC82 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RC3H1Q5TC82 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.08■■■□□ 2.57
RC3H1Q5TC82 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.08■■■□□ 2.57
RC3H1Q5TC82 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
RC3H1Q5TC82 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.07■■■□□ 2.56
RC3H1Q5TC82 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.06■■■□□ 2.56
RC3H1Q5TC82 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.06■■■□□ 2.56
RC3H1Q5TC82 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.06■■■□□ 2.56
RC3H1Q5TC82 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.06■■■□□ 2.56
RC3H1Q5TC82 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
RC3H1Q5TC82 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
RC3H1Q5TC82 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RC3H1Q5TC82 MIR935-201ENST00000401179 91 ntBASIC31.05■■■□□ 2.56
RC3H1Q5TC82 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RC3H1Q5TC82 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RC3H1Q5TC82 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RC3H1Q5TC82 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RC3H1Q5TC82 AC137630.3-201ENST00000607245 391 ntBASIC31.04■■■□□ 2.56
RC3H1Q5TC82 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.04■■■□□ 2.56
RC3H1Q5TC82 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
RC3H1Q5TC82 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
RC3H1Q5TC82 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.03■■■□□ 2.56
RC3H1Q5TC82 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RC3H1Q5TC82 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RC3H1Q5TC82 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RC3H1Q5TC82 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.02■■■□□ 2.56
RC3H1Q5TC82 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
RC3H1Q5TC82 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
RC3H1Q5TC82 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RC3H1Q5TC82 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.01■■■□□ 2.55
RC3H1Q5TC82 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.01■■■□□ 2.55
RC3H1Q5TC82 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.01■■■□□ 2.55
RC3H1Q5TC82 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
RC3H1Q5TC82 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
RC3H1Q5TC82 KRT16P3-201ENST00000439127 1283 ntBASIC31■■■□□ 2.55
RC3H1Q5TC82 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
RC3H1Q5TC82 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RC3H1Q5TC82 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.99■■■□□ 2.55
RC3H1Q5TC82 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
RC3H1Q5TC82 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.98■■■□□ 2.55
RC3H1Q5TC82 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.98■■■□□ 2.55
RC3H1Q5TC82 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RC3H1Q5TC82 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RC3H1Q5TC82 AC021242.3-201ENST00000607598 1377 ntBASIC30.97■■■□□ 2.55
RC3H1Q5TC82 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
RC3H1Q5TC82 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.97■■■□□ 2.55
RC3H1Q5TC82 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.97■■■□□ 2.55
RC3H1Q5TC82 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
RC3H1Q5TC82 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
RC3H1Q5TC82 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
RC3H1Q5TC82 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.95■■■□□ 2.55
RC3H1Q5TC82 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
RC3H1Q5TC82 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RC3H1Q5TC82 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.94■■■□□ 2.54
RC3H1Q5TC82 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.94■■■□□ 2.54
RC3H1Q5TC82 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RC3H1Q5TC82 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.93■■■□□ 2.54
RC3H1Q5TC82 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RC3H1Q5TC82 MIR638-201ENST00000385237 100 ntBASIC30.93■■■□□ 2.54
RC3H1Q5TC82 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.93■■■□□ 2.54
RC3H1Q5TC82 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RC3H1Q5TC82 AC120024.1-201ENST00000562672 995 ntBASIC30.92■■■□□ 2.54
RC3H1Q5TC82 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.92■■■□□ 2.54
RC3H1Q5TC82 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RC3H1Q5TC82 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
RC3H1Q5TC82 AL449106.1-201ENST00000608517 1980 ntBASIC30.91■■■□□ 2.54
RC3H1Q5TC82 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RC3H1Q5TC82 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RC3H1Q5TC82 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms