Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDKN2DP55273 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDKN2DP55273 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.98■■□□□ 1.43
CDKN2DP55273 AC096887.2-201ENST00000623443 1957 ntBASIC23.98■■□□□ 1.43
CDKN2DP55273 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CDKN2DP55273 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDKN2DP55273 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDKN2DP55273 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.97■■□□□ 1.43
CDKN2DP55273 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.97■■□□□ 1.43
CDKN2DP55273 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDKN2DP55273 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CDKN2DP55273 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDKN2DP55273 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.96■■□□□ 1.43
CDKN2DP55273 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDKN2DP55273 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDKN2DP55273 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.96■■□□□ 1.43
CDKN2DP55273 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.96■■□□□ 1.43
CDKN2DP55273 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDKN2DP55273 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDKN2DP55273 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDKN2DP55273 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDKN2DP55273 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDKN2DP55273 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDKN2DP55273 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.94■■□□□ 1.42
CDKN2DP55273 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
CDKN2DP55273 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CDKN2DP55273 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDKN2DP55273 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.94■■□□□ 1.42
CDKN2DP55273 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDKN2DP55273 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.94■■□□□ 1.42
CDKN2DP55273 AC135731.1-201ENST00000569415 2548 ntBASIC23.94■■□□□ 1.42
CDKN2DP55273 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.94■■□□□ 1.42
CDKN2DP55273 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDKN2DP55273 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.93■■□□□ 1.42
CDKN2DP55273 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDKN2DP55273 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CDKN2DP55273 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.93■■□□□ 1.42
CDKN2DP55273 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDKN2DP55273 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.92■■□□□ 1.42
CDKN2DP55273 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDKN2DP55273 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDKN2DP55273 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDKN2DP55273 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.91■■□□□ 1.42
CDKN2DP55273 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.91■■□□□ 1.42
CDKN2DP55273 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.91■■□□□ 1.42
CDKN2DP55273 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.91■■□□□ 1.42
CDKN2DP55273 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKN2DP55273 AC025884.2-201ENST00000553429 711 ntBASIC23.9■■□□□ 1.42
CDKN2DP55273 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.9■■□□□ 1.42
CDKN2DP55273 AC092296.2-201ENST00000589470 999 ntBASIC23.9■■□□□ 1.42
CDKN2DP55273 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKN2DP55273 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKN2DP55273 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKN2DP55273 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKN2DP55273 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKN2DP55273 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDKN2DP55273 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDKN2DP55273 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDKN2DP55273 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDKN2DP55273 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CDKN2DP55273 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.88■■□□□ 1.41
CDKN2DP55273 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDKN2DP55273 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDKN2DP55273 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.88■■□□□ 1.41
CDKN2DP55273 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.88■■□□□ 1.41
CDKN2DP55273 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.87■■□□□ 1.41
CDKN2DP55273 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDKN2DP55273 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CDKN2DP55273 MIR4449-201ENST00000578365 66 ntBASIC23.86■■□□□ 1.41
CDKN2DP55273 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDKN2DP55273 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDKN2DP55273 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDKN2DP55273 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDKN2DP55273 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDKN2DP55273 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.85■■□□□ 1.41
CDKN2DP55273 AC022413.1-201ENST00000624602 984 ntBASIC23.85■■□□□ 1.41
CDKN2DP55273 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDKN2DP55273 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
CDKN2DP55273 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
CDKN2DP55273 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDKN2DP55273 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKN2DP55273 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CDKN2DP55273 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDKN2DP55273 SMPD5-203ENST00000639008 1464 ntBASIC23.84■■□□□ 1.41
CDKN2DP55273 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDKN2DP55273 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.84■■□□□ 1.41
CDKN2DP55273 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKN2DP55273 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
CDKN2DP55273 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.83■■□□□ 1.41
CDKN2DP55273 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKN2DP55273 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.83■■□□□ 1.4
CDKN2DP55273 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDKN2DP55273 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CDKN2DP55273 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CDKN2DP55273 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.82■■□□□ 1.4
CDKN2DP55273 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.82■■□□□ 1.4
CDKN2DP55273 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CDKN2DP55273 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKN2DP55273 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKN2DP55273 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms