Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GSK3AP49840 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
GSK3AP49840 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GSK3AP49840 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
GSK3AP49840 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.01■□□□□ 0.95
GSK3AP49840 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GSK3AP49840 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GSK3AP49840 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21■□□□□ 0.95
GSK3AP49840 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21■□□□□ 0.95
GSK3AP49840 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GSK3AP49840 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21■□□□□ 0.95
GSK3AP49840 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GSK3AP49840 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GSK3AP49840 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GSK3AP49840 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.99■□□□□ 0.95
GSK3AP49840 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GSK3AP49840 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.99■□□□□ 0.95
GSK3AP49840 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GSK3AP49840 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
GSK3AP49840 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
GSK3AP49840 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GSK3AP49840 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.98■□□□□ 0.95
GSK3AP49840 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GSK3AP49840 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GSK3AP49840 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
GSK3AP49840 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GSK3AP49840 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GSK3AP49840 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
GSK3AP49840 AC093323.1-202ENST00000635031 2045 ntBASIC20.97■□□□□ 0.95
GSK3AP49840 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GSK3AP49840 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GSK3AP49840 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GSK3AP49840 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GSK3AP49840 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.96■□□□□ 0.95
GSK3AP49840 ERN1-208ENST00000606895 2068 ntBASIC20.96■□□□□ 0.95
GSK3AP49840 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GSK3AP49840 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
GSK3AP49840 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
GSK3AP49840 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GSK3AP49840 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.95■□□□□ 0.94
GSK3AP49840 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GSK3AP49840 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GSK3AP49840 AC060814.1-201ENST00000554326 538 ntBASIC20.94■□□□□ 0.94
GSK3AP49840 AC010501.1-201ENST00000606270 1962 ntBASIC20.94■□□□□ 0.94
GSK3AP49840 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GSK3AP49840 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GSK3AP49840 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GSK3AP49840 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.93■□□□□ 0.94
GSK3AP49840 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.92■□□□□ 0.94
GSK3AP49840 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.92■□□□□ 0.94
GSK3AP49840 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GSK3AP49840 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.92■□□□□ 0.94
GSK3AP49840 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GSK3AP49840 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.92■□□□□ 0.94
GSK3AP49840 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GSK3AP49840 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GSK3AP49840 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.91■□□□□ 0.94
GSK3AP49840 AL157400.5-201ENST00000507624 621 ntBASIC20.91■□□□□ 0.94
GSK3AP49840 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GSK3AP49840 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
GSK3AP49840 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GSK3AP49840 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GSK3AP49840 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
GSK3AP49840 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GSK3AP49840 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.9■□□□□ 0.94
GSK3AP49840 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GSK3AP49840 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GSK3AP49840 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GSK3AP49840 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GSK3AP49840 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GSK3AP49840 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.89■□□□□ 0.94
GSK3AP49840 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.89■□□□□ 0.93
GSK3AP49840 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.89■□□□□ 0.93
GSK3AP49840 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GSK3AP49840 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GSK3AP49840 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GSK3AP49840 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.88■□□□□ 0.93
GSK3AP49840 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GSK3AP49840 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GSK3AP49840 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.88■□□□□ 0.93
GSK3AP49840 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.88■□□□□ 0.93
GSK3AP49840 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.88■□□□□ 0.93
GSK3AP49840 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GSK3AP49840 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GSK3AP49840 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GSK3AP49840 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.88■□□□□ 0.93
GSK3AP49840 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
GSK3AP49840 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
GSK3AP49840 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.87■□□□□ 0.93
GSK3AP49840 MIR4449-201ENST00000578365 66 ntBASIC20.87■□□□□ 0.93
GSK3AP49840 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms