Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.01■■□□□ 1.75
FOXN3O00409 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
FOXN3O00409 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
FOXN3O00409 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
FOXN3O00409 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26■■□□□ 1.75
FOXN3O00409 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26■■□□□ 1.75
FOXN3O00409 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26■■□□□ 1.75
FOXN3O00409 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26■■□□□ 1.75
FOXN3O00409 AC092296.2-201ENST00000589470 999 ntBASIC26■■□□□ 1.75
FOXN3O00409 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26■■□□□ 1.75
FOXN3O00409 AC025884.2-201ENST00000553429 711 ntBASIC25.99■■□□□ 1.75
FOXN3O00409 AC022413.1-201ENST00000624602 984 ntBASIC25.99■■□□□ 1.75
FOXN3O00409 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
FOXN3O00409 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
FOXN3O00409 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
FOXN3O00409 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
FOXN3O00409 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
FOXN3O00409 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.98■■□□□ 1.75
FOXN3O00409 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN3O00409 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN3O00409 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN3O00409 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN3O00409 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.97■■□□□ 1.75
FOXN3O00409 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
FOXN3O00409 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.96■■□□□ 1.75
FOXN3O00409 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN3O00409 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN3O00409 AC096887.2-201ENST00000623443 1957 ntBASIC25.96■■□□□ 1.75
FOXN3O00409 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.95■■□□□ 1.74
FOXN3O00409 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
FOXN3O00409 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.95■■□□□ 1.74
FOXN3O00409 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.95■■□□□ 1.74
FOXN3O00409 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.94■■□□□ 1.74
FOXN3O00409 SMPD5-203ENST00000639008 1464 ntBASIC25.94■■□□□ 1.74
FOXN3O00409 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
FOXN3O00409 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.94■■□□□ 1.74
FOXN3O00409 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.94■■□□□ 1.74
FOXN3O00409 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
FOXN3O00409 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN3O00409 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
FOXN3O00409 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN3O00409 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
FOXN3O00409 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN3O00409 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.92■■□□□ 1.74
FOXN3O00409 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.92■■□□□ 1.74
FOXN3O00409 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
FOXN3O00409 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN3O00409 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN3O00409 ECEL1P2-201ENST00000461596 1295 ntBASIC25.91■■□□□ 1.74
FOXN3O00409 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.91■■□□□ 1.74
FOXN3O00409 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN3O00409 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
FOXN3O00409 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN3O00409 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN3O00409 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
FOXN3O00409 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.9■■□□□ 1.74
FOXN3O00409 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.9■■□□□ 1.74
FOXN3O00409 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
FOXN3O00409 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.9■■□□□ 1.74
FOXN3O00409 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
FOXN3O00409 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
FOXN3O00409 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
FOXN3O00409 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
FOXN3O00409 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
FOXN3O00409 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
FOXN3O00409 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
FOXN3O00409 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.88■■□□□ 1.73
FOXN3O00409 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
FOXN3O00409 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.88■■□□□ 1.73
FOXN3O00409 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
FOXN3O00409 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
FOXN3O00409 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.87■■□□□ 1.73
FOXN3O00409 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
FOXN3O00409 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN3O00409 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN3O00409 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
FOXN3O00409 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN3O00409 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN3O00409 GPX1-201ENST00000419349 1106 ntBASIC25.85■■□□□ 1.73
FOXN3O00409 MIR3960-201ENST00000583311 91 ntBASIC25.85■■□□□ 1.73
FOXN3O00409 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.85■■□□□ 1.73
FOXN3O00409 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN3O00409 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
FOXN3O00409 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
FOXN3O00409 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN3O00409 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
FOXN3O00409 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN3O00409 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN3O00409 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
FOXN3O00409 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
FOXN3O00409 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.82■■□□□ 1.72
FOXN3O00409 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.82■■□□□ 1.72
FOXN3O00409 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.82■■□□□ 1.72
FOXN3O00409 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.81■■□□□ 1.72
FOXN3O00409 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
FOXN3O00409 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
FOXN3O00409 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
FOXN3O00409 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
FOXN3O00409 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
FOXN3O00409 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms