Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV7-9A0A0J9YWB2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV7-9A0A0J9YWB2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV7-9A0A0J9YWB2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV7-9A0A0J9YWB2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV7-9A0A0J9YWB2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV7-9A0A0J9YWB2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.97■□□□□ 0.47
TRBV7-9A0A0J9YWB2 ERN1-208ENST00000606895 2068 ntBASIC17.97■□□□□ 0.47
TRBV7-9A0A0J9YWB2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV7-9A0A0J9YWB2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV7-9A0A0J9YWB2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRBV7-9A0A0J9YWB2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.96■□□□□ 0.47
TRBV7-9A0A0J9YWB2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV7-9A0A0J9YWB2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TRBV7-9A0A0J9YWB2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV7-9A0A0J9YWB2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRBV7-9A0A0J9YWB2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRBV7-9A0A0J9YWB2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRBV7-9A0A0J9YWB2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
TRBV7-9A0A0J9YWB2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV7-9A0A0J9YWB2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV7-9A0A0J9YWB2 AC142381.3-201ENST00000568208 1670 ntBASIC17.94■□□□□ 0.46
TRBV7-9A0A0J9YWB2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV7-9A0A0J9YWB2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRBV7-9A0A0J9YWB2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-9A0A0J9YWB2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV7-9A0A0J9YWB2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV7-9A0A0J9YWB2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-9A0A0J9YWB2 AL359504.2-201ENST00000605506 1601 ntBASIC17.93■□□□□ 0.46
TRBV7-9A0A0J9YWB2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-9A0A0J9YWB2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV7-9A0A0J9YWB2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 HLA-V-202ENST00000446817 847 ntBASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 ZNRF2P2-203ENST00000454624 420 ntBASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-9A0A0J9YWB2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-9A0A0J9YWB2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-9A0A0J9YWB2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRBV7-9A0A0J9YWB2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-9A0A0J9YWB2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-9A0A0J9YWB2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-9A0A0J9YWB2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRBV7-9A0A0J9YWB2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-9A0A0J9YWB2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV7-9A0A0J9YWB2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV7-9A0A0J9YWB2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV7-9A0A0J9YWB2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRBV7-9A0A0J9YWB2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV7-9A0A0J9YWB2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.89■□□□□ 0.45
TRBV7-9A0A0J9YWB2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV7-9A0A0J9YWB2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 AC096887.2-201ENST00000623443 1957 ntBASIC17.88■□□□□ 0.45
TRBV7-9A0A0J9YWB2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-9A0A0J9YWB2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-9A0A0J9YWB2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-9A0A0J9YWB2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-9A0A0J9YWB2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV7-9A0A0J9YWB2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-9A0A0J9YWB2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-9A0A0J9YWB2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-9A0A0J9YWB2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TRBV7-9A0A0J9YWB2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV7-9A0A0J9YWB2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRBV7-9A0A0J9YWB2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.85■□□□□ 0.45
TRBV7-9A0A0J9YWB2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV7-9A0A0J9YWB2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV7-9A0A0J9YWB2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.85■□□□□ 0.45
TRBV7-9A0A0J9YWB2 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV7-9A0A0J9YWB2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms