Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.77■□□□□ 0.76
SAA2-SAA4A0A096LPE2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAA2-SAA4A0A096LPE2 AC060814.1-201ENST00000554326 538 ntBASIC19.77■□□□□ 0.76
SAA2-SAA4A0A096LPE2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SAA2-SAA4A0A096LPE2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SAA2-SAA4A0A096LPE2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 AL157400.5-201ENST00000507624 621 ntBASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA2-SAA4A0A096LPE2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA2-SAA4A0A096LPE2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA2-SAA4A0A096LPE2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SAA2-SAA4A0A096LPE2 AC096887.2-201ENST00000623443 1957 ntBASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 AC092296.2-201ENST00000589470 999 ntBASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 AC025884.2-201ENST00000553429 711 ntBASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MIR4449-201ENST00000578365 66 ntBASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 AC022413.1-201ENST00000624602 984 ntBASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.65■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.64■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 MIR3960-201ENST00000583311 91 ntBASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 SMPD5-203ENST00000639008 1464 ntBASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms