Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.77■□□□□ 0.76
SAA2-SAA4A0A096LPE2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SAA2-SAA4A0A096LPE2 AC060814.1-201ENST00000554326 538 ntBASIC19.77■□□□□ 0.76
SAA2-SAA4A0A096LPE2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SAA2-SAA4A0A096LPE2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SAA2-SAA4A0A096LPE2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 AL157400.5-201ENST00000507624 621 ntBASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA2-SAA4A0A096LPE2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SAA2-SAA4A0A096LPE2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SAA2-SAA4A0A096LPE2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.72■□□□□ 0.75
SAA2-SAA4A0A096LPE2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA2-SAA4A0A096LPE2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA2-SAA4A0A096LPE2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA2-SAA4A0A096LPE2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SAA2-SAA4A0A096LPE2 AC096887.2-201ENST00000623443 1957 ntBASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 AC092296.2-201ENST00000589470 999 ntBASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 AC025884.2-201ENST00000553429 711 ntBASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 MIR4449-201ENST00000578365 66 ntBASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 AC022413.1-201ENST00000624602 984 ntBASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA2-SAA4A0A096LPE2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.66■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.65■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SAA2-SAA4A0A096LPE2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.64■□□□□ 0.74
SAA2-SAA4A0A096LPE2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SAA2-SAA4A0A096LPE2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 MIR3960-201ENST00000583311 91 ntBASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 SMPD5-203ENST00000639008 1464 ntBASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms