Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CPNE9Q8IYJ1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
CPNE9Q8IYJ1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CPNE9Q8IYJ1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CPNE9Q8IYJ1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CPNE9Q8IYJ1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.07■■□□□ 1.44
CPNE9Q8IYJ1 AC145676.1-201ENST00000514988 2004 ntBASIC24.07■■□□□ 1.44
CPNE9Q8IYJ1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.07■■□□□ 1.44
CPNE9Q8IYJ1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.07■■□□□ 1.44
CPNE9Q8IYJ1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.06■■□□□ 1.44
CPNE9Q8IYJ1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CPNE9Q8IYJ1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.06■■□□□ 1.44
CPNE9Q8IYJ1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPNE9Q8IYJ1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPNE9Q8IYJ1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CPNE9Q8IYJ1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CPNE9Q8IYJ1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.04■■□□□ 1.44
CPNE9Q8IYJ1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CPNE9Q8IYJ1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CPNE9Q8IYJ1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CPNE9Q8IYJ1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
CPNE9Q8IYJ1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPNE9Q8IYJ1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPNE9Q8IYJ1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPNE9Q8IYJ1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.03■■□□□ 1.44
CPNE9Q8IYJ1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPNE9Q8IYJ1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.03■■□□□ 1.44
CPNE9Q8IYJ1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CPNE9Q8IYJ1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CPNE9Q8IYJ1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CPNE9Q8IYJ1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CPNE9Q8IYJ1 AC060814.1-201ENST00000554326 538 ntBASIC24.02■■□□□ 1.44
CPNE9Q8IYJ1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CPNE9Q8IYJ1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CPNE9Q8IYJ1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CPNE9Q8IYJ1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CPNE9Q8IYJ1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CPNE9Q8IYJ1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CPNE9Q8IYJ1 DUSP8P4-201ENST00000399538 1761 ntBASIC24.01■■□□□ 1.43
CPNE9Q8IYJ1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CPNE9Q8IYJ1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CPNE9Q8IYJ1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24■■□□□ 1.43
CPNE9Q8IYJ1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
CPNE9Q8IYJ1 AL157400.5-201ENST00000507624 621 ntBASIC23.99■■□□□ 1.43
CPNE9Q8IYJ1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CPNE9Q8IYJ1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.99■■□□□ 1.43
CPNE9Q8IYJ1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CPNE9Q8IYJ1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE9Q8IYJ1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CPNE9Q8IYJ1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CPNE9Q8IYJ1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.97■■□□□ 1.43
CPNE9Q8IYJ1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPNE9Q8IYJ1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CPNE9Q8IYJ1 MIR4449-201ENST00000578365 66 ntBASIC23.97■■□□□ 1.43
CPNE9Q8IYJ1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.97■■□□□ 1.43
CPNE9Q8IYJ1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CPNE9Q8IYJ1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CPNE9Q8IYJ1 ERN1-208ENST00000606895 2068 ntBASIC23.96■■□□□ 1.43
CPNE9Q8IYJ1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPNE9Q8IYJ1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPNE9Q8IYJ1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPNE9Q8IYJ1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CPNE9Q8IYJ1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPNE9Q8IYJ1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.95■■□□□ 1.43
CPNE9Q8IYJ1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE9Q8IYJ1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE9Q8IYJ1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.95■■□□□ 1.42
CPNE9Q8IYJ1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE9Q8IYJ1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE9Q8IYJ1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.94■■□□□ 1.42
CPNE9Q8IYJ1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CPNE9Q8IYJ1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPNE9Q8IYJ1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPNE9Q8IYJ1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPNE9Q8IYJ1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPNE9Q8IYJ1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.93■■□□□ 1.42
CPNE9Q8IYJ1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.93■■□□□ 1.42
CPNE9Q8IYJ1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.93■■□□□ 1.42
CPNE9Q8IYJ1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPNE9Q8IYJ1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPNE9Q8IYJ1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPNE9Q8IYJ1 AC022413.1-201ENST00000624602 984 ntBASIC23.92■■□□□ 1.42
CPNE9Q8IYJ1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPNE9Q8IYJ1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CPNE9Q8IYJ1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPNE9Q8IYJ1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.91■■□□□ 1.42
CPNE9Q8IYJ1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.91■■□□□ 1.42
CPNE9Q8IYJ1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPNE9Q8IYJ1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CPNE9Q8IYJ1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CPNE9Q8IYJ1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.91■■□□□ 1.42
CPNE9Q8IYJ1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms