Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF546Q86UE3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF546Q86UE3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF546Q86UE3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF546Q86UE3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.14■□□□□ 0.81
ZNF546Q86UE3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF546Q86UE3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF546Q86UE3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF546Q86UE3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF546Q86UE3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF546Q86UE3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF546Q86UE3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ZNF546Q86UE3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF546Q86UE3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
ZNF546Q86UE3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF546Q86UE3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF546Q86UE3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF546Q86UE3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF546Q86UE3 CLDN5-201ENST00000403084 2357 ntBASIC20.11■□□□□ 0.81
ZNF546Q86UE3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF546Q86UE3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF546Q86UE3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNF546Q86UE3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF546Q86UE3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF546Q86UE3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF546Q86UE3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF546Q86UE3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF546Q86UE3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF546Q86UE3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF546Q86UE3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF546Q86UE3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF546Q86UE3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF546Q86UE3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF546Q86UE3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF546Q86UE3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF546Q86UE3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZNF546Q86UE3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF546Q86UE3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF546Q86UE3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF546Q86UE3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF546Q86UE3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
ZNF546Q86UE3 AC010501.1-201ENST00000606270 1962 ntBASIC20.08■□□□□ 0.8
ZNF546Q86UE3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF546Q86UE3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ZNF546Q86UE3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ZNF546Q86UE3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF546Q86UE3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF546Q86UE3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ZNF546Q86UE3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF546Q86UE3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF546Q86UE3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF546Q86UE3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.06■□□□□ 0.8
ZNF546Q86UE3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF546Q86UE3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF546Q86UE3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZNF546Q86UE3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF546Q86UE3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF546Q86UE3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF546Q86UE3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNF546Q86UE3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF546Q86UE3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF546Q86UE3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ZNF546Q86UE3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF546Q86UE3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ZNF546Q86UE3 AC142472.1-201ENST00000612013 1741 ntBASIC20.04■□□□□ 0.8
ZNF546Q86UE3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF546Q86UE3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF546Q86UE3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF546Q86UE3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF546Q86UE3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF546Q86UE3 WHAMMP3-201ENST00000611636 1609 ntBASIC20.02■□□□□ 0.8
ZNF546Q86UE3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF546Q86UE3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
ZNF546Q86UE3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF546Q86UE3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ZNF546Q86UE3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF546Q86UE3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF546Q86UE3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms