Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NHLRC1Q6VVB1 AC126177.7-201ENST00000547904 679 ntBASIC21.85■■□□□ 1.09
NHLRC1Q6VVB1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
NHLRC1Q6VVB1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NHLRC1Q6VVB1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NHLRC1Q6VVB1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NHLRC1Q6VVB1 AL157400.5-201ENST00000507624 621 ntBASIC21.84■■□□□ 1.09
NHLRC1Q6VVB1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NHLRC1Q6VVB1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NHLRC1Q6VVB1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NHLRC1Q6VVB1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.83■■□□□ 1.09
NHLRC1Q6VVB1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NHLRC1Q6VVB1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NHLRC1Q6VVB1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NHLRC1Q6VVB1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NHLRC1Q6VVB1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NHLRC1Q6VVB1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NHLRC1Q6VVB1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NHLRC1Q6VVB1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.8■■□□□ 1.08
NHLRC1Q6VVB1 AC092296.2-201ENST00000589470 999 ntBASIC21.8■■□□□ 1.08
NHLRC1Q6VVB1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NHLRC1Q6VVB1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NHLRC1Q6VVB1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.79■■□□□ 1.08
NHLRC1Q6VVB1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.79■■□□□ 1.08
NHLRC1Q6VVB1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NHLRC1Q6VVB1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.79■■□□□ 1.08
NHLRC1Q6VVB1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NHLRC1Q6VVB1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NHLRC1Q6VVB1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
NHLRC1Q6VVB1 AC025884.2-201ENST00000553429 711 ntBASIC21.77■■□□□ 1.08
NHLRC1Q6VVB1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NHLRC1Q6VVB1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.77■■□□□ 1.08
NHLRC1Q6VVB1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NHLRC1Q6VVB1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NHLRC1Q6VVB1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NHLRC1Q6VVB1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NHLRC1Q6VVB1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NHLRC1Q6VVB1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
NHLRC1Q6VVB1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.76■■□□□ 1.07
NHLRC1Q6VVB1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.76■■□□□ 1.07
NHLRC1Q6VVB1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NHLRC1Q6VVB1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.76■■□□□ 1.07
NHLRC1Q6VVB1 AC092803.2-201ENST00000564287 1899 ntBASIC21.76■■□□□ 1.07
NHLRC1Q6VVB1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NHLRC1Q6VVB1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.75■■□□□ 1.07
NHLRC1Q6VVB1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.75■■□□□ 1.07
NHLRC1Q6VVB1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.75■■□□□ 1.07
NHLRC1Q6VVB1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NHLRC1Q6VVB1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.75■■□□□ 1.07
NHLRC1Q6VVB1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NHLRC1Q6VVB1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NHLRC1Q6VVB1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NHLRC1Q6VVB1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NHLRC1Q6VVB1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NHLRC1Q6VVB1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NHLRC1Q6VVB1 AC022413.1-201ENST00000624602 984 ntBASIC21.74■■□□□ 1.07
NHLRC1Q6VVB1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
NHLRC1Q6VVB1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NHLRC1Q6VVB1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 AC145676.1-201ENST00000514988 2004 ntBASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NHLRC1Q6VVB1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NHLRC1Q6VVB1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.72■■□□□ 1.07
NHLRC1Q6VVB1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NHLRC1Q6VVB1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NHLRC1Q6VVB1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NHLRC1Q6VVB1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NHLRC1Q6VVB1 ECEL1P2-201ENST00000461596 1295 ntBASIC21.71■■□□□ 1.07
NHLRC1Q6VVB1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NHLRC1Q6VVB1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.71■■□□□ 1.07
NHLRC1Q6VVB1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NHLRC1Q6VVB1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.07
NHLRC1Q6VVB1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.7■■□□□ 1.06
NHLRC1Q6VVB1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.7■■□□□ 1.06
NHLRC1Q6VVB1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NHLRC1Q6VVB1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms