Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 AL121603.2-201ENST00000557373 2117 ntBASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 AC092803.2-201ENST00000564287 1899 ntBASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.38■□□□□ 0.53
CDPF1Q6NVV7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDPF1Q6NVV7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 LINC00565-201ENST00000562710 2331 ntBASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 C1orf229-201ENST00000623686 2258 ntBASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CDPF1Q6NVV7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDPF1Q6NVV7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDPF1Q6NVV7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDPF1Q6NVV7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDPF1Q6NVV7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDPF1Q6NVV7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDPF1Q6NVV7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDPF1Q6NVV7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDPF1Q6NVV7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDPF1Q6NVV7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 RPS2P35-201ENST00000443417 897 ntBASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 AP006261.1-201ENST00000584783 668 ntBASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 AC142381.3-201ENST00000568208 1670 ntBASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms