RNA–Protein interactions for RNA: ENST00000326427.10

ITM2C-202, Transcript of integral membrane protein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2C, Length 2,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-202ENST00000326427 NISCHQ9Y2I1 1504 aa45.9■■■■■ 4.94
ITM2C-202ENST00000326427 CCDC180Q9P1Z9 1646 aa39.21■■■■□ 3.87
ITM2C-202ENST00000326427 ZCCHC6Q5VYS8 1495 aaKnown RBP38.88■■■■□ 3.81
ITM2C-202ENST00000326427 SHROOM4Q9ULL8 1493 aa38.75■■■■□ 3.79
ITM2C-202ENST00000326427 SUPT5HO00267 1087 aaKnown RBP38.01■■■■□ 3.68
ITM2C-202ENST00000326427 DCAF1Q9Y4B6 1507 aa37.84■■■■□ 3.65
ITM2C-202ENST00000326427 DCAF8L2P0C7V8 631 aa37.52■■■■□ 3.6
ITM2C-202ENST00000326427 CHIC1Q5VXU3 224 aa37.17■■■■□ 3.54
ITM2C-202ENST00000326427 MYO15BQ96JP2 1530 aa37.07■■■■□ 3.52
ITM2C-202ENST00000326427 ABCC9O60706 1549 aa36.73■■■■□ 3.47
ITM2C-202ENST00000326427 SCRIBQ14160 1630 aa36.46■■■■□ 3.43
ITM2C-202ENST00000326427 RSF1Q96T23 1441 aaPredicted RBP36.26■■■■□ 3.39
ITM2C-202ENST00000326427 NACADO15069 1562 aa36.13■■■■□ 3.37
ITM2C-202ENST00000326427 HRCP23327 699 aa36.12■■■■□ 3.37
ITM2C-202ENST00000326427 RB1CC1Q8TDY2 1594 aa35.98■■■■□ 3.35
ITM2C-202ENST00000326427 LOC105371045A0A1W2PR82 267 aa35.9■■■■□ 3.34
ITM2C-202ENST00000326427 PCGF6Q9BYE7 350 aa35.9■■■■□ 3.34
ITM2C-202ENST00000326427 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
ITM2C-202ENST00000326427 MROH2BQ7Z745 1585 aa35.61■■■■□ 3.29
ITM2C-202ENST00000326427 TRIM41Q8WV44 630 aa35.52■■■■□ 3.28
ITM2C-202ENST00000326427 WIZO95785 1651 aa35.44■■■■□ 3.26
ITM2C-202ENST00000326427 TRIM26Q12899 539 aaPredicted RBP35.39■■■■□ 3.26
ITM2C-202ENST00000326427 BAZ1AQ9NRL2 1556 aaPredicted RBP35.35■■■■□ 3.25
ITM2C-202ENST00000326427 EIF4G1Q04637 1599 aaKnown RBP35.16■■■■□ 3.22
ITM2C-202ENST00000326427 PPARGC1BQ86YN6 1023 aaKnown RBP35.14■■■■□ 3.22
ITM2C-202ENST00000326427 FAM9AQ8IZU1 332 aaPredicted RBP35.05■■■■□ 3.2
ITM2C-202ENST00000326427 UNC13AQ9UPW8 1703 aa35.03■■■■□ 3.2
ITM2C-202ENST00000326427 TOP2AP11388 1531 aaKnown RBP34.98■■■■□ 3.19
ITM2C-202ENST00000326427 SMARCA4P51532 1647 aa34.98■■■■□ 3.19
ITM2C-202ENST00000326427 SMARCA2P51531 1590 aa34.76■■■■□ 3.15
ITM2C-202ENST00000326427 ZEB1P37275 1124 aaPredicted RBP34.72■■■■□ 3.15
ITM2C-202ENST00000326427 CCDC88BA6NC98 1476 aa34.72■■■■□ 3.15
ITM2C-202ENST00000326427 EHMT2Q96KQ7 1210 aa34.59■■■■□ 3.13
ITM2C-202ENST00000326427 ABCC8Q09428 1581 aa34.58■■■■□ 3.13
ITM2C-202ENST00000326427 BICRAQ9NZM4 1560 aa34.52■■■■□ 3.12
ITM2C-202ENST00000326427 PEG3Q9GZU2 1588 aa34.42■■■■□ 3.1
ITM2C-202ENST00000326427 EEA1Q15075 1411 aa34.29■■■■□ 3.08
ITM2C-202ENST00000326427 WRNQ14191 1432 aaPredicted RBP eCLIP34.27■■■■□ 3.08
ITM2C-202ENST00000326427 SOGA1O94964 1423 aa34.23■■■■□ 3.07
ITM2C-202ENST00000326427 PABPN1Q86U42 306 aaKnown RBP eCLIP34.17■■■■□ 3.06
ITM2C-202ENST00000326427 TNIKQ9UKE5 1360 aa34.16■■■■□ 3.06
ITM2C-202ENST00000326427 CEP162Q5TB80 1403 aa34.16■■■■□ 3.06
ITM2C-202ENST00000326427 RUSC2Q8N2Y8 1516 aa34.05■■■■□ 3.04
ITM2C-202ENST00000326427 CSRNP3Q8WYN3 585 aa34.03■■■■□ 3.04
ITM2C-202ENST00000326427 ATAD2BQ9ULI0 1458 aa33.99■■■■□ 3.03
ITM2C-202ENST00000326427 GOLGA3Q08378 1498 aa33.97■■■■□ 3.03
ITM2C-202ENST00000326427 SYNJ1O43426 1573 aa33.93■■■■□ 3.02
ITM2C-202ENST00000326427 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
ITM2C-202ENST00000326427 KIF21BO75037 1637 aa33.85■■■■□ 3.01
ITM2C-202ENST00000326427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.81■■■■□ 3
ITM2C-202ENST00000326427 CEP164Q9UPV0 1460 aa33.79■■■■□ 3
ITM2C-202ENST00000326427 UBTFP17480 764 aaKnown RBP33.78■■■■□ 3
ITM2C-202ENST00000326427 CCER1Q8TC90 406 aaPredicted RBP33.76■■■■□ 3
ITM2C-202ENST00000326427 TOP2BQ02880 1626 aa33.59■■■□□ 2.97
ITM2C-202ENST00000326427 TTBK1Q5TCY1 1321 aaPredicted RBP33.54■■■□□ 2.96
ITM2C-202ENST00000326427 BIVM-ERCC5R4GMW8 1640 aa33.53■■■□□ 2.96
ITM2C-202ENST00000326427 CLIP1P30622 1438 aa33.51■■■□□ 2.95
ITM2C-202ENST00000326427 HMGXB3Q12766 1538 aa33.46■■■□□ 2.95
ITM2C-202ENST00000326427 RAPGEF2Q9Y4G8 1499 aa33.45■■■□□ 2.94
ITM2C-202ENST00000326427 VPS8Q8N3P4 1428 aa33.43■■■□□ 2.94
ITM2C-202ENST00000326427 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
ITM2C-202ENST00000326427 ERICH3Q5RHP9 1530 aa33.3■■■□□ 2.92
ITM2C-202ENST00000326427 PRXQ9BXM0 1461 aa33.22■■■□□ 2.91
ITM2C-202ENST00000326427 SCAF1Q9H7N4 1312 aaKnown RBP33.21■■■□□ 2.91
ITM2C-202ENST00000326427 CUX1P39880 1505 aa33.18■■■□□ 2.9
ITM2C-202ENST00000326427 DIEXFQ68CQ4 756 aaKnown RBP33.17■■■□□ 2.9
ITM2C-202ENST00000326427 CFTRP13569 1480 aa33.11■■■□□ 2.89
ITM2C-202ENST00000326427 APLP2Q06481 763 aa33.08■■■□□ 2.89
ITM2C-202ENST00000326427 PRDM2Q13029 1718 aa33.06■■■□□ 2.88
ITM2C-202ENST00000326427 ARAP1Q96P48 1450 aa33.03■■■□□ 2.88
ITM2C-202ENST00000326427 HNRNPUL2Q1KMD3 747 aaKnown RBP33.01■■■□□ 2.87
ITM2C-202ENST00000326427 KIF27Q86VH2 1401 aa33■■■□□ 2.87
ITM2C-202ENST00000326427 ZNF316A6NFI3 1004 aaPredicted RBP32.97■■■□□ 2.87
ITM2C-202ENST00000326427 ACIN1Q9UKV3 1341 aaKnown RBP32.96■■■□□ 2.87
ITM2C-202ENST00000326427 RANGAP1P46060 587 aaPredicted RBP32.89■■■□□ 2.86
ITM2C-202ENST00000326427 NEUROD1Q13562 356 aa32.84■■■□□ 2.85
ITM2C-202ENST00000326427 CENPBP07199 599 aaPredicted RBP32.78■■■□□ 2.84
ITM2C-202ENST00000326427 ARHGAP35Q9NRY4 1499 aa32.72■■■□□ 2.83
ITM2C-202ENST00000326427 PELP1Q8IZL8 1130 aaKnown RBP32.71■■■□□ 2.83
ITM2C-202ENST00000326427 RRBP1Q9P2E9 1410 aaKnown RBP32.7■■■□□ 2.83
ITM2C-202ENST00000326427 CLSPNQ9HAW4 1339 aa32.7■■■□□ 2.82
ITM2C-202ENST00000326427 KANK4Q5T7N3 995 aaPredicted RBP32.67■■■□□ 2.82
ITM2C-202ENST00000326427 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
ITM2C-202ENST00000326427 CUX2O14529 1486 aa32.62■■■□□ 2.81
ITM2C-202ENST00000326427 IGF1RP08069 1367 aa32.6■■■□□ 2.81
ITM2C-202ENST00000326427 DHX57Q6P158 1386 aaKnown RBP32.6■■■□□ 2.81
ITM2C-202ENST00000326427 FGD5Q6ZNL6 1462 aa32.54■■■□□ 2.8
ITM2C-202ENST00000326427 MAP3K1Q13233 1512 aa32.52■■■□□ 2.8
ITM2C-202ENST00000326427 GTF3C3Q9Y5Q9 886 aa32.48■■■□□ 2.79
ITM2C-202ENST00000326427 CCNB3Q8WWL7 1395 aa32.47■■■□□ 2.79
ITM2C-202ENST00000326427 CC2D2AQ9P2K1 1620 aa32.45■■■□□ 2.79
ITM2C-202ENST00000326427 CARMIL1Q5VZK9 1371 aa32.45■■■□□ 2.78
ITM2C-202ENST00000326427 TIAM1Q13009 1591 aa32.45■■■□□ 2.78
ITM2C-202ENST00000326427 MIER1Q8N108 512 aa32.42■■■□□ 2.78
ITM2C-202ENST00000326427 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
ITM2C-202ENST00000326427 DNMBPQ6XZF7 1577 aa32.32■■■□□ 2.76
ITM2C-202ENST00000326427 CFAP43Q8NDM7 1665 aa32.3■■■□□ 2.76
ITM2C-202ENST00000326427 LRRC9Q6ZRR7 1453 aa32.27■■■□□ 2.76
ITM2C-202ENST00000326427 FHAD1B1AJZ9 1412 aa32.25■■■□□ 2.75
ITM2C-202ENST00000326427 ABCA10Q8WWZ4 1543 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms