RNA–Protein interactions for RNA: ENST00000264993.7

CDV3-201, Transcript of CDV3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDV3, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-201ENST00000264993 NISCHQ9Y2I1 1504 aa38.81■■■■□ 3.8
CDV3-201ENST00000264993 CCDC180Q9P1Z9 1646 aa34.35■■■■□ 3.09
CDV3-201ENST00000264993 SUPT5HO00267 1087 aaKnown RBP34.18■■■■□ 3.06
CDV3-201ENST00000264993 SHROOM4Q9ULL8 1493 aa34.18■■■■□ 3.06
CDV3-201ENST00000264993 PPARGC1BQ86YN6 1023 aaKnown RBP34.08■■■■□ 3.05
CDV3-201ENST00000264993 PCGF6Q9BYE7 350 aa33.93■■■■□ 3.02
CDV3-201ENST00000264993 HRCP23327 699 aa33.86■■■■□ 3.01
CDV3-201ENST00000264993 MYO15BQ96JP2 1530 aa32.79■■■□□ 2.84
CDV3-201ENST00000264993 CHIC1Q5VXU3 224 aa32.74■■■□□ 2.83
CDV3-201ENST00000264993 LOC105371045A0A1W2PR82 267 aa32.71■■■□□ 2.83
CDV3-201ENST00000264993 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
CDV3-201ENST00000264993 ZCCHC6Q5VYS8 1495 aaKnown RBP32.56■■■□□ 2.8
CDV3-201ENST00000264993 EHMT2Q96KQ7 1210 aa32.51■■■□□ 2.79
CDV3-201ENST00000264993 SCAF1Q9H7N4 1312 aaKnown RBP32.42■■■□□ 2.78
CDV3-201ENST00000264993 ABCC9O60706 1549 aa32.41■■■□□ 2.78
CDV3-201ENST00000264993 PELP1Q8IZL8 1130 aaKnown RBP32.4■■■□□ 2.78
CDV3-201ENST00000264993 DCAF1Q9Y4B6 1507 aa32.35■■■□□ 2.77
CDV3-201ENST00000264993 TRIM26Q12899 539 aaPredicted RBP32.02■■■□□ 2.72
CDV3-201ENST00000264993 NACADO15069 1562 aa31.99■■■□□ 2.71
CDV3-201ENST00000264993 FAM9AQ8IZU1 332 aaPredicted RBP31.94■■■□□ 2.7
CDV3-201ENST00000264993 RB1CC1Q8TDY2 1594 aa31.77■■■□□ 2.68
CDV3-201ENST00000264993 NEUROD1Q13562 356 aa31.61■■■□□ 2.65
CDV3-201ENST00000264993 TTBK1Q5TCY1 1321 aaPredicted RBP31.6■■■□□ 2.65
CDV3-201ENST00000264993 GTF3C3Q9Y5Q9 886 aa31.59■■■□□ 2.65
CDV3-201ENST00000264993 ZEB1P37275 1124 aaPredicted RBP31.49■■■□□ 2.63
CDV3-201ENST00000264993 YTHDC1Q96MU7 727 aaKnown RBP31.45■■■□□ 2.63
CDV3-201ENST00000264993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.42■■■□□ 2.62
CDV3-201ENST00000264993 ACIN1Q9UKV3 1341 aaKnown RBP31.4■■■□□ 2.62
CDV3-201ENST00000264993 CCER1Q8TC90 406 aaPredicted RBP31.27■■■□□ 2.6
CDV3-201ENST00000264993 UNC13AQ9UPW8 1703 aa31.16■■■□□ 2.58
CDV3-201ENST00000264993 CENPBP07199 599 aaPredicted RBP31.11■■■□□ 2.57
CDV3-201ENST00000264993 SCRIBQ14160 1630 aa31.11■■■□□ 2.57
CDV3-201ENST00000264993 TRIM41Q8WV44 630 aa31.08■■■□□ 2.57
CDV3-201ENST00000264993 DIEXFQ68CQ4 756 aaKnown RBP31.06■■■□□ 2.56
CDV3-201ENST00000264993 MYT1Q01538 1121 aa30.92■■■□□ 2.54
CDV3-201ENST00000264993 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
CDV3-201ENST00000264993 MIER1Q8N108 512 aa30.32■■■□□ 2.44
CDV3-201ENST00000264993 PABPN1Q86U42 306 aaKnown RBP eCLIP30.26■■■□□ 2.44
CDV3-201ENST00000264993 ZNF316A6NFI3 1004 aaPredicted RBP30.17■■■□□ 2.42
CDV3-201ENST00000264993 HNRNPUL2Q1KMD3 747 aaKnown RBP30.14■■■□□ 2.42
CDV3-201ENST00000264993 BAZ1AQ9NRL2 1556 aaPredicted RBP30.04■■■□□ 2.4
CDV3-201ENST00000264993 BCANQ96GW7 911 aa30.03■■■□□ 2.4
CDV3-201ENST00000264993 CECR2Q9BXF3 1484 aa30.01■■■□□ 2.39
CDV3-201ENST00000264993 RANGAP1P46060 587 aaPredicted RBP30■■■□□ 2.39
CDV3-201ENST00000264993 SMARCA4P51532 1647 aa29.98■■■□□ 2.39
CDV3-201ENST00000264993 BCL11AQ9H165 835 aa29.88■■■□□ 2.37
CDV3-201ENST00000264993 EIF4G1Q04637 1599 aaKnown RBP29.88■■■□□ 2.37
CDV3-201ENST00000264993 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
CDV3-201ENST00000264993 PEG3Q9GZU2 1588 aa29.82■■■□□ 2.36
CDV3-201ENST00000264993 RSF1Q96T23 1441 aaPredicted RBP29.8■■■□□ 2.36
CDV3-201ENST00000264993 UBTFP17480 764 aaKnown RBP29.79■■■□□ 2.36
CDV3-201ENST00000264993 SUPT16HQ9Y5B9 1047 aaKnown RBP29.69■■■□□ 2.34
CDV3-201ENST00000264993 CSRNP3Q8WYN3 585 aa29.66■■■□□ 2.34
CDV3-201ENST00000264993 ANP32EQ9BTT0 268 aa29.61■■■□□ 2.33
CDV3-201ENST00000264993 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
CDV3-201ENST00000264993 WIZO95785 1651 aa29.59■■■□□ 2.33
CDV3-201ENST00000264993 TSHZ2Q9NRE2 1034 aa29.58■■■□□ 2.33
CDV3-201ENST00000264993 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
CDV3-201ENST00000264993 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
CDV3-201ENST00000264993 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
CDV3-201ENST00000264993 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
CDV3-201ENST00000264993 TOP2AP11388 1531 aaKnown RBP29.41■■■□□ 2.3
CDV3-201ENST00000264993 ITGAEP38570 1179 aa29.4■■■□□ 2.3
CDV3-201ENST00000264993 KCNH8Q96L42 1107 aa29.38■■■□□ 2.29
CDV3-201ENST00000264993 FKBP8Q14318 412 aa29.3■■■□□ 2.28
CDV3-201ENST00000264993 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
CDV3-201ENST00000264993 APLP2Q06481 763 aa29.24■■■□□ 2.27
CDV3-201ENST00000264993 CEP162Q5TB80 1403 aa29.18■■■□□ 2.26
CDV3-201ENST00000264993 TRIM52Q96A61 297 aa29.04■■■□□ 2.24
CDV3-201ENST00000264993 ERICH6Q7L0X2 663 aa29.02■■■□□ 2.24
CDV3-201ENST00000264993 HIRIP3Q9BW71 556 aaPredicted RBP29.02■■■□□ 2.24
CDV3-201ENST00000264993 NEFLP07196 543 aa28.98■■■□□ 2.23
CDV3-201ENST00000264993 IRX6P78412 446 aaPredicted RBP28.97■■■□□ 2.23
CDV3-201ENST00000264993 RBM19Q9Y4C8 960 aaKnown RBP28.97■■■□□ 2.23
CDV3-201ENST00000264993 SOGA1O94964 1423 aa28.96■■■□□ 2.23
CDV3-201ENST00000264993 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
CDV3-201ENST00000264993 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
CDV3-201ENST00000264993 DDX10Q13206 875 aaKnown RBP28.89■■■□□ 2.22
CDV3-201ENST00000264993 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
CDV3-201ENST00000264993 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
CDV3-201ENST00000264993 PRDM2Q13029 1718 aa28.68■■■□□ 2.18
CDV3-201ENST00000264993 MSH5O43196 834 aa28.68■■■□□ 2.18
CDV3-201ENST00000264993 CLSPNQ9HAW4 1339 aa28.64■■■□□ 2.18
CDV3-201ENST00000264993 WRNQ14191 1432 aaPredicted RBP eCLIP28.63■■■□□ 2.17
CDV3-201ENST00000264993 TNIKQ9UKE5 1360 aa28.63■■■□□ 2.17
CDV3-201ENST00000264993 CFTRP13569 1480 aa28.63■■■□□ 2.17
CDV3-201ENST00000264993 NBR1Q14596 966 aa28.61■■■□□ 2.17
CDV3-201ENST00000264993 LAMC3Q9Y6N6 1575 aa28.59■■■□□ 2.17
CDV3-201ENST00000264993 PRKCSHP14314 528 aaPredicted RBP28.57■■■□□ 2.16
CDV3-201ENST00000264993 CNGB1Q14028 1251 aaPredicted RBP28.54■■■□□ 2.16
CDV3-201ENST00000264993 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
CDV3-201ENST00000264993 CLIP1P30622 1438 aa28.45■■■□□ 2.14
CDV3-201ENST00000264993 SIN3AQ96ST3 1273 aa28.44■■■□□ 2.14
CDV3-201ENST00000264993 DHX57Q6P158 1386 aaKnown RBP28.42■■■□□ 2.14
CDV3-201ENST00000264993 KANK4Q5T7N3 995 aaPredicted RBP28.41■■■□□ 2.14
CDV3-201ENST00000264993 SENP3-EIF4A1A0A087X0R7 540 aa28.41■■■□□ 2.14
CDV3-201ENST00000264993 CDK11AQ9UQ88 783 aaPredicted RBP28.4■■■□□ 2.14
CDV3-201ENST00000264993 RTN4Q9NQC3 1192 aaKnown RBP28.38■■■□□ 2.13
CDV3-201ENST00000264993 ATP1B4Q9UN42 357 aaPredicted RBP28.38■■■□□ 2.13
CDV3-201ENST00000264993 DEKP35659 375 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms