RNA–Protein interactions for RNA: ENST00000361271.7

HACD1-202, Transcript of 3-hydroxyacyl-CoA dehydratase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD1-202ENST00000361271 NISCHQ9Y2I1 1504 aa46.14■■■■■ 4.98
HACD1-202ENST00000361271 CCDC180Q9P1Z9 1646 aa39.35■■■■□ 3.89
HACD1-202ENST00000361271 ZCCHC6Q5VYS8 1495 aaKnown RBP39.05■■■■□ 3.84
HACD1-202ENST00000361271 SHROOM4Q9ULL8 1493 aa39.05■■■■□ 3.84
HACD1-202ENST00000361271 SUPT5HO00267 1087 aaKnown RBP38.28■■■■□ 3.72
HACD1-202ENST00000361271 DCAF1Q9Y4B6 1507 aa37.97■■■■□ 3.67
HACD1-202ENST00000361271 DCAF8L2P0C7V8 631 aa37.95■■■■□ 3.67
HACD1-202ENST00000361271 CHIC1Q5VXU3 224 aa37.33■■■■□ 3.57
HACD1-202ENST00000361271 MYO15BQ96JP2 1530 aa37.18■■■■□ 3.54
HACD1-202ENST00000361271 ABCC9O60706 1549 aa36.85■■■■□ 3.49
HACD1-202ENST00000361271 SCRIBQ14160 1630 aa36.7■■■■□ 3.47
HACD1-202ENST00000361271 RSF1Q96T23 1441 aaPredicted RBP36.45■■■■□ 3.43
HACD1-202ENST00000361271 NACADO15069 1562 aa36.35■■■■□ 3.41
HACD1-202ENST00000361271 HRCP23327 699 aa36.12■■■■□ 3.37
HACD1-202ENST00000361271 LOC105371045A0A1W2PR82 267 aa36.12■■■■□ 3.37
HACD1-202ENST00000361271 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
HACD1-202ENST00000361271 PCGF6Q9BYE7 350 aa36.03■■■■□ 3.36
HACD1-202ENST00000361271 CECR2Q9BXF3 1484 aa35.9■■■■□ 3.34
HACD1-202ENST00000361271 MROH2BQ7Z745 1585 aa35.82■■■■□ 3.32
HACD1-202ENST00000361271 TRIM41Q8WV44 630 aa35.74■■■■□ 3.31
HACD1-202ENST00000361271 WIZO95785 1651 aa35.62■■■■□ 3.29
HACD1-202ENST00000361271 BAZ1AQ9NRL2 1556 aaPredicted RBP35.48■■■■□ 3.27
HACD1-202ENST00000361271 TRIM26Q12899 539 aaPredicted RBP35.48■■■■□ 3.27
HACD1-202ENST00000361271 FAM9AQ8IZU1 332 aaPredicted RBP35.33■■■■□ 3.25
HACD1-202ENST00000361271 EIF4G1Q04637 1599 aaKnown RBP35.24■■■■□ 3.23
HACD1-202ENST00000361271 PPARGC1BQ86YN6 1023 aaKnown RBP35.24■■■■□ 3.23
HACD1-202ENST00000361271 UNC13AQ9UPW8 1703 aa35.19■■■■□ 3.22
HACD1-202ENST00000361271 SMARCA4P51532 1647 aa35.16■■■■□ 3.22
HACD1-202ENST00000361271 TOP2AP11388 1531 aaKnown RBP35.14■■■■□ 3.22
HACD1-202ENST00000361271 CCDC88BA6NC98 1476 aa34.93■■■■□ 3.18
HACD1-202ENST00000361271 SMARCA2P51531 1590 aa34.92■■■■□ 3.18
HACD1-202ENST00000361271 EHMT2Q96KQ7 1210 aa34.92■■■■□ 3.18
HACD1-202ENST00000361271 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
HACD1-202ENST00000361271 BICRAQ9NZM4 1560 aa34.75■■■■□ 3.15
HACD1-202ENST00000361271 ZEB1P37275 1124 aaPredicted RBP34.73■■■■□ 3.15
HACD1-202ENST00000361271 PABPN1Q86U42 306 aaKnown RBP eCLIP34.58■■■■□ 3.13
HACD1-202ENST00000361271 PEG3Q9GZU2 1588 aa34.55■■■■□ 3.12
HACD1-202ENST00000361271 SOGA1O94964 1423 aa34.43■■■■□ 3.1
HACD1-202ENST00000361271 EEA1Q15075 1411 aa34.39■■■■□ 3.1
HACD1-202ENST00000361271 WRNQ14191 1432 aaPredicted RBP eCLIP34.33■■■■□ 3.09
HACD1-202ENST00000361271 CEP162Q5TB80 1403 aa34.3■■■■□ 3.08
HACD1-202ENST00000361271 TNIKQ9UKE5 1360 aa34.29■■■■□ 3.08
HACD1-202ENST00000361271 RUSC2Q8N2Y8 1516 aa34.25■■■■□ 3.07
HACD1-202ENST00000361271 CSRNP3Q8WYN3 585 aa34.24■■■■□ 3.07
HACD1-202ENST00000361271 ATAD2BQ9ULI0 1458 aa34.23■■■■□ 3.07
HACD1-202ENST00000361271 BAZ1BQ9UIG0 1483 aaKnown RBP34.12■■■■□ 3.05
HACD1-202ENST00000361271 GOLGA3Q08378 1498 aa34.1■■■■□ 3.05
HACD1-202ENST00000361271 SYNJ1O43426 1573 aa34.09■■■■□ 3.05
HACD1-202ENST00000361271 UBTFP17480 764 aaKnown RBP34.02■■■■□ 3.04
HACD1-202ENST00000361271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.96■■■■□ 3.03
HACD1-202ENST00000361271 KIF21BO75037 1637 aa33.93■■■■□ 3.02
HACD1-202ENST00000361271 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
HACD1-202ENST00000361271 CCER1Q8TC90 406 aaPredicted RBP33.9■■■■□ 3.02
HACD1-202ENST00000361271 TTBK1Q5TCY1 1321 aaPredicted RBP33.83■■■■□ 3.01
HACD1-202ENST00000361271 TOP2BQ02880 1626 aa33.73■■■□□ 2.99
HACD1-202ENST00000361271 CLIP1P30622 1438 aa33.66■■■□□ 2.98
HACD1-202ENST00000361271 HMGXB3Q12766 1538 aa33.64■■■□□ 2.98
HACD1-202ENST00000361271 BIVM-ERCC5R4GMW8 1640 aa33.64■■■□□ 2.98
HACD1-202ENST00000361271 RAPGEF2Q9Y4G8 1499 aa33.62■■■□□ 2.97
HACD1-202ENST00000361271 NCAPD3P42695 1498 aa33.6■■■□□ 2.97
HACD1-202ENST00000361271 VPS8Q8N3P4 1428 aa33.55■■■□□ 2.96
HACD1-202ENST00000361271 ERICH3Q5RHP9 1530 aa33.4■■■□□ 2.94
HACD1-202ENST00000361271 PRXQ9BXM0 1461 aa33.37■■■□□ 2.93
HACD1-202ENST00000361271 CUX1P39880 1505 aa33.36■■■□□ 2.93
HACD1-202ENST00000361271 CFTRP13569 1480 aa33.31■■■□□ 2.92
HACD1-202ENST00000361271 APLP2Q06481 763 aa33.28■■■□□ 2.92
HACD1-202ENST00000361271 DIEXFQ68CQ4 756 aaKnown RBP33.22■■■□□ 2.91
HACD1-202ENST00000361271 HNRNPUL2Q1KMD3 747 aaKnown RBP33.22■■■□□ 2.91
HACD1-202ENST00000361271 RANGAP1P46060 587 aaPredicted RBP33.21■■■□□ 2.91
HACD1-202ENST00000361271 KIF27Q86VH2 1401 aa33.19■■■□□ 2.9
HACD1-202ENST00000361271 SCAF1Q9H7N4 1312 aaKnown RBP33.18■■■□□ 2.9
HACD1-202ENST00000361271 ARAP1Q96P48 1450 aa33.16■■■□□ 2.9
HACD1-202ENST00000361271 PRDM2Q13029 1718 aa33.13■■■□□ 2.89
HACD1-202ENST00000361271 ZNF316A6NFI3 1004 aaPredicted RBP33.05■■■□□ 2.88
HACD1-202ENST00000361271 ACIN1Q9UKV3 1341 aaKnown RBP32.95■■■□□ 2.87
HACD1-202ENST00000361271 CADPSQ9ULU8 1353 aa32.91■■■□□ 2.86
HACD1-202ENST00000361271 ARHGAP35Q9NRY4 1499 aa32.88■■■□□ 2.85
HACD1-202ENST00000361271 KANK4Q5T7N3 995 aaPredicted RBP32.87■■■□□ 2.85
HACD1-202ENST00000361271 NEUROD1Q13562 356 aa32.86■■■□□ 2.85
HACD1-202ENST00000361271 CUX2O14529 1486 aa32.85■■■□□ 2.85
HACD1-202ENST00000361271 IGF1RP08069 1367 aa32.82■■■□□ 2.84
HACD1-202ENST00000361271 RRBP1Q9P2E9 1410 aaKnown RBP32.79■■■□□ 2.84
HACD1-202ENST00000361271 CENPBP07199 599 aaPredicted RBP32.78■■■□□ 2.84
HACD1-202ENST00000361271 FGD5Q6ZNL6 1462 aa32.76■■■□□ 2.83
HACD1-202ENST00000361271 CLSPNQ9HAW4 1339 aa32.73■■■□□ 2.83
HACD1-202ENST00000361271 CC2D2AQ9P2K1 1620 aa32.71■■■□□ 2.83
HACD1-202ENST00000361271 DHX57Q6P158 1386 aaKnown RBP32.7■■■□□ 2.83
HACD1-202ENST00000361271 CARMIL1Q5VZK9 1371 aa32.67■■■□□ 2.82
HACD1-202ENST00000361271 CCNB3Q8WWL7 1395 aa32.6■■■□□ 2.81
HACD1-202ENST00000361271 FANCD2Q9BXW9 1451 aa32.59■■■□□ 2.81
HACD1-202ENST00000361271 MAP3K1Q13233 1512 aa32.58■■■□□ 2.81
HACD1-202ENST00000361271 TIAM1Q13009 1591 aa32.55■■■□□ 2.8
HACD1-202ENST00000361271 PELP1Q8IZL8 1130 aaKnown RBP32.52■■■□□ 2.8
HACD1-202ENST00000361271 MIER1Q8N108 512 aa32.51■■■□□ 2.79
HACD1-202ENST00000361271 GTF3C3Q9Y5Q9 886 aa32.5■■■□□ 2.79
HACD1-202ENST00000361271 DNMBPQ6XZF7 1577 aa32.5■■■□□ 2.79
HACD1-202ENST00000361271 ABCA10Q8WWZ4 1543 aa32.42■■■□□ 2.78
HACD1-202ENST00000361271 LRRC9Q6ZRR7 1453 aa32.4■■■□□ 2.78
HACD1-202ENST00000361271 TOPBP1Q92547 1522 aa32.4■■■□□ 2.78
HACD1-202ENST00000361271 FHAD1B1AJZ9 1412 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms