Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P1Q5VSP4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.85■■□□□ 1.09
LCN1P1Q5VSP4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P1Q5VSP4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P1Q5VSP4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P1Q5VSP4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P1Q5VSP4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.84■■□□□ 1.09
LCN1P1Q5VSP4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P1Q5VSP4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.84■■□□□ 1.09
LCN1P1Q5VSP4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P1Q5VSP4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P1Q5VSP4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
LCN1P1Q5VSP4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LCN1P1Q5VSP4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LCN1P1Q5VSP4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LCN1P1Q5VSP4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LCN1P1Q5VSP4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P1Q5VSP4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
LCN1P1Q5VSP4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P1Q5VSP4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P1Q5VSP4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.82■■□□□ 1.08
LCN1P1Q5VSP4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P1Q5VSP4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P1Q5VSP4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P1Q5VSP4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN1P1Q5VSP4 AC010501.1-201ENST00000606270 1962 ntBASIC21.81■■□□□ 1.08
LCN1P1Q5VSP4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.81■■□□□ 1.08
LCN1P1Q5VSP4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN1P1Q5VSP4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.81■■□□□ 1.08
LCN1P1Q5VSP4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LCN1P1Q5VSP4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN1P1Q5VSP4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LCN1P1Q5VSP4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P1Q5VSP4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P1Q5VSP4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P1Q5VSP4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LCN1P1Q5VSP4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P1Q5VSP4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P1Q5VSP4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.8■■□□□ 1.08
LCN1P1Q5VSP4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LCN1P1Q5VSP4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LCN1P1Q5VSP4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.79■■□□□ 1.08
LCN1P1Q5VSP4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LCN1P1Q5VSP4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LCN1P1Q5VSP4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.78■■□□□ 1.08
LCN1P1Q5VSP4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.78■■□□□ 1.08
LCN1P1Q5VSP4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LCN1P1Q5VSP4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCN1P1Q5VSP4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.78■■□□□ 1.08
LCN1P1Q5VSP4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LCN1P1Q5VSP4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
LCN1P1Q5VSP4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.77■■□□□ 1.08
LCN1P1Q5VSP4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCN1P1Q5VSP4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LCN1P1Q5VSP4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCN1P1Q5VSP4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.76■■□□□ 1.07
LCN1P1Q5VSP4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LCN1P1Q5VSP4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P1Q5VSP4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P1Q5VSP4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.75■■□□□ 1.07
LCN1P1Q5VSP4 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.75■■□□□ 1.07
LCN1P1Q5VSP4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P1Q5VSP4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P1Q5VSP4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.75■■□□□ 1.07
LCN1P1Q5VSP4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LCN1P1Q5VSP4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P1Q5VSP4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P1Q5VSP4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LCN1P1Q5VSP4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.74■■□□□ 1.07
LCN1P1Q5VSP4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P1Q5VSP4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P1Q5VSP4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.73■■□□□ 1.07
LCN1P1Q5VSP4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P1Q5VSP4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LCN1P1Q5VSP4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LCN1P1Q5VSP4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P1Q5VSP4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P1Q5VSP4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LCN1P1Q5VSP4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LCN1P1Q5VSP4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LCN1P1Q5VSP4 ERN1-208ENST00000606895 2068 ntBASIC21.72■■□□□ 1.07
LCN1P1Q5VSP4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCN1P1Q5VSP4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LCN1P1Q5VSP4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.71■■□□□ 1.07
LCN1P1Q5VSP4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LCN1P1Q5VSP4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.7■■□□□ 1.06
LCN1P1Q5VSP4 LINC01971-201ENST00000617888 1048 ntBASIC21.7■■□□□ 1.06
LCN1P1Q5VSP4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
LCN1P1Q5VSP4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LCN1P1Q5VSP4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms