Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1AQ02539 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1AQ02539 AC142472.1-201ENST00000612013 1741 ntBASIC18.43■□□□□ 0.54
HIST1H1AQ02539 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1AQ02539 ZNRF2P2-203ENST00000454624 420 ntBASIC18.43■□□□□ 0.54
HIST1H1AQ02539 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.43■□□□□ 0.54
HIST1H1AQ02539 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HIST1H1AQ02539 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1AQ02539 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HIST1H1AQ02539 AC092803.2-201ENST00000564287 1899 ntBASIC18.43■□□□□ 0.54
HIST1H1AQ02539 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.42■□□□□ 0.54
HIST1H1AQ02539 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.42■□□□□ 0.54
HIST1H1AQ02539 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.41■□□□□ 0.54
HIST1H1AQ02539 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H1AQ02539 AC008813.1-201ENST00000536597 885 ntBASIC18.41■□□□□ 0.54
HIST1H1AQ02539 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.41■□□□□ 0.54
HIST1H1AQ02539 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H1AQ02539 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.41■□□□□ 0.54
HIST1H1AQ02539 AC020928.2-201ENST00000588717 2197 ntBASIC18.41■□□□□ 0.54
HIST1H1AQ02539 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.41■□□□□ 0.54
HIST1H1AQ02539 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
HIST1H1AQ02539 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1AQ02539 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1AQ02539 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
HIST1H1AQ02539 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1AQ02539 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
HIST1H1AQ02539 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H1AQ02539 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1AQ02539 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H1AQ02539 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HIST1H1AQ02539 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H1AQ02539 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.37■□□□□ 0.53
HIST1H1AQ02539 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H1AQ02539 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H1AQ02539 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H1AQ02539 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H1AQ02539 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H1AQ02539 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H1AQ02539 MIR219A2-201ENST00000608502 1504 ntBASIC18.36■□□□□ 0.53
HIST1H1AQ02539 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H1AQ02539 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H1AQ02539 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H1AQ02539 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H1AQ02539 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H1AQ02539 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
HIST1H1AQ02539 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HIST1H1AQ02539 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HIST1H1AQ02539 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.33■□□□□ 0.53
HIST1H1AQ02539 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H1AQ02539 ABHD17AP4-201ENST00000411545 909 ntBASIC18.33■□□□□ 0.52
HIST1H1AQ02539 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H1AQ02539 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H1AQ02539 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HIST1H1AQ02539 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H1AQ02539 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H1AQ02539 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 AC148477.6-201ENST00000623746 465 ntBASIC18.32■□□□□ 0.52
HIST1H1AQ02539 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.32■□□□□ 0.52
HIST1H1AQ02539 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1AQ02539 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1AQ02539 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1AQ02539 HLA-V-202ENST00000446817 847 ntBASIC18.31■□□□□ 0.52
HIST1H1AQ02539 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST1H1AQ02539 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms