Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.5■■□□□ 1.19
LCN1P31025 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
LCN1P31025 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
LCN1P31025 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
LCN1P31025 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.49■■□□□ 1.19
LCN1P31025 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
LCN1P31025 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LCN1P31025 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LCN1P31025 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
LCN1P31025 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.48■■□□□ 1.19
LCN1P31025 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
LCN1P31025 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
LCN1P31025 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LCN1P31025 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
LCN1P31025 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
LCN1P31025 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LCN1P31025 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LCN1P31025 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LCN1P31025 GPX1-201ENST00000419349 1106 ntBASIC22.46■■□□□ 1.19
LCN1P31025 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LCN1P31025 SMPD5-203ENST00000639008 1464 ntBASIC22.46■■□□□ 1.19
LCN1P31025 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LCN1P31025 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.46■■□□□ 1.19
LCN1P31025 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
LCN1P31025 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
LCN1P31025 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.45■■□□□ 1.19
LCN1P31025 MIR3960-201ENST00000583311 91 ntBASIC22.45■■□□□ 1.18
LCN1P31025 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.45■■□□□ 1.18
LCN1P31025 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LCN1P31025 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
LCN1P31025 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
LCN1P31025 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.45■■□□□ 1.18
LCN1P31025 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LCN1P31025 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LCN1P31025 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LCN1P31025 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LCN1P31025 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.44■■□□□ 1.18
LCN1P31025 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.44■■□□□ 1.18
LCN1P31025 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.44■■□□□ 1.18
LCN1P31025 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.44■■□□□ 1.18
LCN1P31025 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
LCN1P31025 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LCN1P31025 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.43■■□□□ 1.18
LCN1P31025 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.43■■□□□ 1.18
LCN1P31025 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LCN1P31025 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.43■■□□□ 1.18
LCN1P31025 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LCN1P31025 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LCN1P31025 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
LCN1P31025 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
LCN1P31025 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
LCN1P31025 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.42■■□□□ 1.18
LCN1P31025 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LCN1P31025 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LCN1P31025 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
LCN1P31025 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
LCN1P31025 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.41■■□□□ 1.18
LCN1P31025 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.41■■□□□ 1.18
LCN1P31025 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.41■■□□□ 1.18
LCN1P31025 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
LCN1P31025 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LCN1P31025 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LCN1P31025 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LCN1P31025 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LCN1P31025 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LCN1P31025 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LCN1P31025 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.4■■□□□ 1.18
LCN1P31025 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.4■■□□□ 1.18
LCN1P31025 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LCN1P31025 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.39■■□□□ 1.17
LCN1P31025 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.39■■□□□ 1.17
LCN1P31025 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LCN1P31025 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LCN1P31025 RNF126P1-201ENST00000567452 1320 ntBASIC22.38■■□□□ 1.17
LCN1P31025 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LCN1P31025 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.38■■□□□ 1.17
LCN1P31025 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LCN1P31025 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
LCN1P31025 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LCN1P31025 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
LCN1P31025 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
LCN1P31025 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LCN1P31025 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.37■■□□□ 1.17
LCN1P31025 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.37■■□□□ 1.17
LCN1P31025 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LCN1P31025 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LCN1P31025 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LCN1P31025 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LCN1P31025 AC092803.2-201ENST00000564287 1899 ntBASIC22.35■■□□□ 1.17
LCN1P31025 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.35■■□□□ 1.17
LCN1P31025 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.35■■□□□ 1.17
LCN1P31025 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
LCN1P31025 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.34■■□□□ 1.17
LCN1P31025 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.34■■□□□ 1.17
LCN1P31025 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LCN1P31025 RP9P-202ENST00000450133 1212 ntBASIC22.34■■□□□ 1.17
LCN1P31025 AC007029.1-201ENST00000604183 313 ntBASIC22.34■■□□□ 1.17
LCN1P31025 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.34■■□□□ 1.17
LCN1P31025 AC145676.1-201ENST00000514988 2004 ntBASIC22.33■■□□□ 1.17
LCN1P31025 AC091060.1-201ENST00000623524 1766 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms