Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB1P01920 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB1P01920 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DQB1P01920 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB1P01920 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB1P01920 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
HLA-DQB1P01920 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB1P01920 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.08■□□□□ 0.97
HLA-DQB1P01920 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.08■□□□□ 0.97
HLA-DQB1P01920 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
HLA-DQB1P01920 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DQB1P01920 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HLA-DQB1P01920 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB1P01920 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HLA-DQB1P01920 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
HLA-DQB1P01920 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HLA-DQB1P01920 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB1P01920 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB1P01920 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB1P01920 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB1P01920 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB1P01920 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB1P01920 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HLA-DQB1P01920 CLDN5-201ENST00000403084 2357 ntBASIC21.05■□□□□ 0.96
HLA-DQB1P01920 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HLA-DQB1P01920 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB1P01920 WHAMMP3-201ENST00000611636 1609 ntBASIC21.04■□□□□ 0.96
HLA-DQB1P01920 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-DQB1P01920 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB1P01920 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB1P01920 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB1P01920 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HLA-DQB1P01920 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB1P01920 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB1P01920 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB1P01920 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB1P01920 MIR762-201ENST00000390236 83 ntBASIC21.03■□□□□ 0.96
HLA-DQB1P01920 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
HLA-DQB1P01920 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.02■□□□□ 0.96
HLA-DQB1P01920 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB1P01920 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB1P01920 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.02■□□□□ 0.95
HLA-DQB1P01920 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HLA-DQB1P01920 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HLA-DQB1P01920 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB1P01920 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB1P01920 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB1P01920 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB1P01920 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB1P01920 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB1P01920 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.01■□□□□ 0.95
HLA-DQB1P01920 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB1P01920 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB1P01920 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DQB1P01920 CHML-205ENST00000638160 705 ntTSL 3 BASIC21■□□□□ 0.95
HLA-DQB1P01920 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB1P01920 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB1P01920 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB1P01920 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 LINC00273-201ENST00000539813 1452 ntBASIC20.99■□□□□ 0.95
HLA-DQB1P01920 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB1P01920 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB1P01920 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB1P01920 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.98■□□□□ 0.95
HLA-DQB1P01920 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.98■□□□□ 0.95
HLA-DQB1P01920 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB1P01920 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-DQB1P01920 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB1P01920 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.97■□□□□ 0.95
HLA-DQB1P01920 AC097639.1-201ENST00000565519 1891 ntBASIC20.97■□□□□ 0.95
HLA-DQB1P01920 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB1P01920 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB1P01920 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB1P01920 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB1P01920 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HLA-DQB1P01920 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB1P01920 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms