RNA–Protein interactions for RNA: ENST00000603302.5

HADH-209, Transcript of hydroxyacyl-CoA dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene HADH, Length 2,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HADH-209ENST00000603302 NISCHQ9Y2I1 1504 aa46.6■■■■■ 5.05
HADH-209ENST00000603302 CCDC180Q9P1Z9 1646 aa40.95■■■■■ 4.15
HADH-209ENST00000603302 ABCC9O60706 1549 aa39.16■■■■□ 3.86
HADH-209ENST00000603302 ZCCHC6Q5VYS8 1495 aaKnown RBP39.03■■■■□ 3.84
HADH-209ENST00000603302 DCAF8L2P0C7V8 631 aa38.67■■■■□ 3.78
HADH-209ENST00000603302 DCAF1Q9Y4B6 1507 aa38.52■■■■□ 3.76
HADH-209ENST00000603302 MYO15BQ96JP2 1530 aa38.25■■■■□ 3.71
HADH-209ENST00000603302 NACADO15069 1562 aa38.22■■■■□ 3.71
HADH-209ENST00000603302 RB1CC1Q8TDY2 1594 aa38.04■■■■□ 3.68
HADH-209ENST00000603302 SHROOM4Q9ULL8 1493 aa37.85■■■■□ 3.65
HADH-209ENST00000603302 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
HADH-209ENST00000603302 SUPT5HO00267 1087 aaKnown RBP37.37■■■■□ 3.57
HADH-209ENST00000603302 UNC13AQ9UPW8 1703 aa37.34■■■■□ 3.57
HADH-209ENST00000603302 BICRAQ9NZM4 1560 aa36.89■■■■□ 3.5
HADH-209ENST00000603302 CHIC1Q5VXU3 224 aa36.86■■■■□ 3.49
HADH-209ENST00000603302 PABPN1Q86U42 306 aaKnown RBP eCLIP36.8■■■■□ 3.48
HADH-209ENST00000603302 HRCP23327 699 aa36.71■■■■□ 3.47
HADH-209ENST00000603302 CECR2Q9BXF3 1484 aa36.25■■■■□ 3.39
HADH-209ENST00000603302 PCGF6Q9BYE7 350 aa36.07■■■■□ 3.36
HADH-209ENST00000603302 BAZ1AQ9NRL2 1556 aaPredicted RBP36.04■■■■□ 3.36
HADH-209ENST00000603302 MROH2BQ7Z745 1585 aa35.99■■■■□ 3.35
HADH-209ENST00000603302 SMARCA4P51532 1647 aa35.97■■■■□ 3.35
HADH-209ENST00000603302 RSF1Q96T23 1441 aaPredicted RBP35.92■■■■□ 3.34
HADH-209ENST00000603302 EIF4G1Q04637 1599 aaKnown RBP35.83■■■■□ 3.33
HADH-209ENST00000603302 WIZO95785 1651 aa35.71■■■■□ 3.31
HADH-209ENST00000603302 LOC105371045A0A1W2PR82 267 aa35.55■■■■□ 3.28
HADH-209ENST00000603302 TRIM26Q12899 539 aaPredicted RBP35.52■■■■□ 3.28
HADH-209ENST00000603302 PEG3Q9GZU2 1588 aa35.52■■■■□ 3.28
HADH-209ENST00000603302 PPARGC1BQ86YN6 1023 aaKnown RBP35.52■■■■□ 3.28
HADH-209ENST00000603302 ATAD2BQ9ULI0 1458 aa35.47■■■■□ 3.27
HADH-209ENST00000603302 SMARCA2P51531 1590 aa35.46■■■■□ 3.27
HADH-209ENST00000603302 CC2D2AQ9P2K1 1620 aa35.45■■■■□ 3.27
HADH-209ENST00000603302 TOP2AP11388 1531 aaKnown RBP35.3■■■■□ 3.24
HADH-209ENST00000603302 BAZ1BQ9UIG0 1483 aaKnown RBP35.27■■■■□ 3.24
HADH-209ENST00000603302 NCAPD3P42695 1498 aa35.24■■■■□ 3.23
HADH-209ENST00000603302 HMGXB3Q12766 1538 aa35.19■■■■□ 3.22
HADH-209ENST00000603302 ZEB1P37275 1124 aaPredicted RBP35.15■■■■□ 3.22
HADH-209ENST00000603302 DNAJC5BQ9UF47 199 aa34.97■■■■□ 3.19
HADH-209ENST00000603302 TRIM41Q8WV44 630 aa34.94■■■■□ 3.18
HADH-209ENST00000603302 CCDC88BA6NC98 1476 aa34.91■■■■□ 3.18
HADH-209ENST00000603302 FAM9AQ8IZU1 332 aaPredicted RBP34.42■■■■□ 3.1
HADH-209ENST00000603302 PELP1Q8IZL8 1130 aaKnown RBP34.37■■■■□ 3.09
HADH-209ENST00000603302 CFTRP13569 1480 aa34.32■■■■□ 3.08
HADH-209ENST00000603302 CADPSQ9ULU8 1353 aa34.31■■■■□ 3.08
HADH-209ENST00000603302 PRDM2Q13029 1718 aa34.25■■■■□ 3.07
HADH-209ENST00000603302 NESP48681 1621 aa34.21■■■■□ 3.07
HADH-209ENST00000603302 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
HADH-209ENST00000603302 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
HADH-209ENST00000603302 ABCC8Q09428 1581 aa34.04■■■■□ 3.04
HADH-209ENST00000603302 SCAF1Q9H7N4 1312 aaKnown RBP34.03■■■■□ 3.04
HADH-209ENST00000603302 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.03
HADH-209ENST00000603302 PDS5BQ9NTI5 1447 aa33.9■■■■□ 3.02
HADH-209ENST00000603302 EHMT2Q96KQ7 1210 aa33.89■■■■□ 3.02
HADH-209ENST00000603302 KIF21AQ7Z4S6 1674 aa33.87■■■■□ 3.01
HADH-209ENST00000603302 CEP164Q9UPV0 1460 aa33.8■■■■□ 3
HADH-209ENST00000603302 EEA1Q15075 1411 aa33.78■■■■□ 3
HADH-209ENST00000603302 CCER1Q8TC90 406 aaPredicted RBP33.77■■■■□ 3
HADH-209ENST00000603302 SYNJ1O43426 1573 aa33.76■■■■□ 3
HADH-209ENST00000603302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.73■■■□□ 2.99
HADH-209ENST00000603302 TNIKQ9UKE5 1360 aa33.72■■■□□ 2.99
HADH-209ENST00000603302 CEP162Q5TB80 1403 aa33.72■■■□□ 2.99
HADH-209ENST00000603302 CUX1P39880 1505 aa33.69■■■□□ 2.98
HADH-209ENST00000603302 TOP2BQ02880 1626 aa33.67■■■□□ 2.98
HADH-209ENST00000603302 BIVM-ERCC5R4GMW8 1640 aa33.66■■■□□ 2.98
HADH-209ENST00000603302 ACIN1Q9UKV3 1341 aaKnown RBP33.65■■■□□ 2.98
HADH-209ENST00000603302 ERCC6Q03468 1493 aa33.64■■■□□ 2.98
HADH-209ENST00000603302 DNMBPQ6XZF7 1577 aa33.57■■■□□ 2.97
HADH-209ENST00000603302 URB2Q14146 1524 aaKnown RBP33.56■■■□□ 2.96
HADH-209ENST00000603302 TOPBP1Q92547 1522 aa33.53■■■□□ 2.96
HADH-209ENST00000603302 MRC2Q9UBG0 1479 aa33.52■■■□□ 2.96
HADH-209ENST00000603302 SOGA1O94964 1423 aa33.5■■■□□ 2.95
HADH-209ENST00000603302 DIEXFQ68CQ4 756 aaKnown RBP33.48■■■□□ 2.95
HADH-209ENST00000603302 GOLGA3Q08378 1498 aa33.44■■■□□ 2.94
HADH-209ENST00000603302 CENPBP07199 599 aaPredicted RBP33.42■■■□□ 2.94
HADH-209ENST00000603302 NEUROD1Q13562 356 aa33.41■■■□□ 2.94
HADH-209ENST00000603302 FGD5Q6ZNL6 1462 aa33.41■■■□□ 2.94
HADH-209ENST00000603302 THOC2Q8NI27 1593 aaKnown RBP33.41■■■□□ 2.94
HADH-209ENST00000603302 CSRNP3Q8WYN3 585 aa33.4■■■□□ 2.94
HADH-209ENST00000603302 WDR62O43379 1518 aa33.36■■■□□ 2.93
HADH-209ENST00000603302 POLA1P09884 1462 aaPredicted RBP33.31■■■□□ 2.92
HADH-209ENST00000603302 KIF21BO75037 1637 aa33.3■■■□□ 2.92
HADH-209ENST00000603302 RUSC2Q8N2Y8 1516 aa33.29■■■□□ 2.92
HADH-209ENST00000603302 RAD54L2Q9Y4B4 1467 aa33.21■■■□□ 2.91
HADH-209ENST00000603302 ZNF316A6NFI3 1004 aaPredicted RBP33.18■■■□□ 2.9
HADH-209ENST00000603302 UBTFP17480 764 aaKnown RBP33.14■■■□□ 2.9
HADH-209ENST00000603302 GTF3C3Q9Y5Q9 886 aa33.12■■■□□ 2.89
HADH-209ENST00000603302 CUX2O14529 1486 aa33.11■■■□□ 2.89
HADH-209ENST00000603302 WDR97A6NE52 1622 aa33.09■■■□□ 2.89
HADH-209ENST00000603302 ABCA10Q8WWZ4 1543 aa33.09■■■□□ 2.89
HADH-209ENST00000603302 TARBP1Q13395 1621 aaKnown RBP33.09■■■□□ 2.89
HADH-209ENST00000603302 KIF27Q86VH2 1401 aa33.04■■■□□ 2.88
HADH-209ENST00000603302 TTBK1Q5TCY1 1321 aaPredicted RBP33.02■■■□□ 2.88
HADH-209ENST00000603302 IFT140Q96RY7 1462 aa33.01■■■□□ 2.88
HADH-209ENST00000603302 VPS8Q8N3P4 1428 aa32.99■■■□□ 2.87
HADH-209ENST00000603302 CLIP1P30622 1438 aa32.97■■■□□ 2.87
HADH-209ENST00000603302 TDRD9Q8NDG6 1382 aaKnown RBP32.92■■■□□ 2.86
HADH-209ENST00000603302 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
HADH-209ENST00000603302 MYT1Q01538 1121 aa32.89■■■□□ 2.85
HADH-209ENST00000603302 ZNF608Q9ULD9 1512 aaPredicted RBP32.85■■■□□ 2.85
HADH-209ENST00000603302 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms