RNA–Protein interactions for RNA: ENST00000301305.7

SLC39A4-202, Transcript of solute carrier family 39 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A4, Length 2,174 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-202ENST00000301305 NISCHQ9Y2I1 1504 aa45.72■■■■■ 4.91
SLC39A4-202ENST00000301305 CCDC180Q9P1Z9 1646 aa39.05■■■■□ 3.84
SLC39A4-202ENST00000301305 ZCCHC6Q5VYS8 1495 aaKnown RBP38.76■■■■□ 3.8
SLC39A4-202ENST00000301305 SHROOM4Q9ULL8 1493 aa38.56■■■■□ 3.76
SLC39A4-202ENST00000301305 SUPT5HO00267 1087 aaKnown RBP37.99■■■■□ 3.67
SLC39A4-202ENST00000301305 DCAF1Q9Y4B6 1507 aa37.81■■■■□ 3.64
SLC39A4-202ENST00000301305 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
SLC39A4-202ENST00000301305 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
SLC39A4-202ENST00000301305 MYO15BQ96JP2 1530 aa37.09■■■■□ 3.53
SLC39A4-202ENST00000301305 ABCC9O60706 1549 aa36.65■■■■□ 3.46
SLC39A4-202ENST00000301305 HRCP23327 699 aa36.6■■■■□ 3.45
SLC39A4-202ENST00000301305 SCRIBQ14160 1630 aa36.18■■■■□ 3.38
SLC39A4-202ENST00000301305 PCGF6Q9BYE7 350 aa36.17■■■■□ 3.38
SLC39A4-202ENST00000301305 RSF1Q96T23 1441 aaPredicted RBP36.16■■■■□ 3.38
SLC39A4-202ENST00000301305 RB1CC1Q8TDY2 1594 aa35.98■■■■□ 3.35
SLC39A4-202ENST00000301305 NACADO15069 1562 aa35.96■■■■□ 3.35
SLC39A4-202ENST00000301305 LOC105371045A0A1W2PR82 267 aa35.92■■■■□ 3.34
SLC39A4-202ENST00000301305 TRIM26Q12899 539 aaPredicted RBP35.75■■■■□ 3.31
SLC39A4-202ENST00000301305 TRIM41Q8WV44 630 aa35.59■■■■□ 3.29
SLC39A4-202ENST00000301305 MROH2BQ7Z745 1585 aa35.4■■■■□ 3.26
SLC39A4-202ENST00000301305 CECR2Q9BXF3 1484 aa35.39■■■■□ 3.26
SLC39A4-202ENST00000301305 PPARGC1BQ86YN6 1023 aaKnown RBP35.37■■■■□ 3.25
SLC39A4-202ENST00000301305 ZEB1P37275 1124 aaPredicted RBP35.3■■■■□ 3.24
SLC39A4-202ENST00000301305 BAZ1AQ9NRL2 1556 aaPredicted RBP35.26■■■■□ 3.23
SLC39A4-202ENST00000301305 WIZO95785 1651 aa35.22■■■■□ 3.23
SLC39A4-202ENST00000301305 EIF4G1Q04637 1599 aaKnown RBP35.05■■■■□ 3.2
SLC39A4-202ENST00000301305 FAM9AQ8IZU1 332 aaPredicted RBP34.98■■■■□ 3.19
SLC39A4-202ENST00000301305 TOP2AP11388 1531 aaKnown RBP34.89■■■■□ 3.18
SLC39A4-202ENST00000301305 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
SLC39A4-202ENST00000301305 UNC13AQ9UPW8 1703 aa34.64■■■■□ 3.14
SLC39A4-202ENST00000301305 SMARCA2P51531 1590 aa34.62■■■■□ 3.13
SLC39A4-202ENST00000301305 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
SLC39A4-202ENST00000301305 WRNQ14191 1432 aaPredicted RBP eCLIP34.48■■■■□ 3.11
SLC39A4-202ENST00000301305 EEA1Q15075 1411 aa34.47■■■■□ 3.11
SLC39A4-202ENST00000301305 EHMT2Q96KQ7 1210 aa34.42■■■■□ 3.1
SLC39A4-202ENST00000301305 ABCC8Q09428 1581 aa34.41■■■■□ 3.1
SLC39A4-202ENST00000301305 TNIKQ9UKE5 1360 aa34.29■■■■□ 3.08
SLC39A4-202ENST00000301305 PEG3Q9GZU2 1588 aa34.29■■■■□ 3.08
SLC39A4-202ENST00000301305 CEP162Q5TB80 1403 aa34.22■■■■□ 3.07
SLC39A4-202ENST00000301305 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
SLC39A4-202ENST00000301305 SOGA1O94964 1423 aa34.13■■■■□ 3.05
SLC39A4-202ENST00000301305 CSRNP3Q8WYN3 585 aa34.08■■■■□ 3.05
SLC39A4-202ENST00000301305 GOLGA3Q08378 1498 aa34.05■■■■□ 3.04
SLC39A4-202ENST00000301305 CCER1Q8TC90 406 aaPredicted RBP34.04■■■■□ 3.04
SLC39A4-202ENST00000301305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.95■■■■□ 3.02
SLC39A4-202ENST00000301305 KIF21BO75037 1637 aa33.9■■■■□ 3.02
SLC39A4-202ENST00000301305 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
SLC39A4-202ENST00000301305 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
SLC39A4-202ENST00000301305 UBTFP17480 764 aaKnown RBP33.81■■■■□ 3
SLC39A4-202ENST00000301305 ATAD2BQ9ULI0 1458 aa33.77■■■■□ 3
SLC39A4-202ENST00000301305 PELP1Q8IZL8 1130 aaKnown RBP33.77■■■■□ 3
SLC39A4-202ENST00000301305 SYNJ1O43426 1573 aa33.77■■■■□ 3
SLC39A4-202ENST00000301305 PABPN1Q86U42 306 aaKnown RBP eCLIP33.72■■■□□ 2.99
SLC39A4-202ENST00000301305 BAZ1BQ9UIG0 1483 aaKnown RBP33.72■■■□□ 2.99
SLC39A4-202ENST00000301305 SCAF1Q9H7N4 1312 aaKnown RBP33.66■■■□□ 2.98
SLC39A4-202ENST00000301305 CLIP1P30622 1438 aa33.56■■■□□ 2.96
SLC39A4-202ENST00000301305 DIEXFQ68CQ4 756 aaKnown RBP33.54■■■□□ 2.96
SLC39A4-202ENST00000301305 VPS8Q8N3P4 1428 aa33.53■■■□□ 2.96
SLC39A4-202ENST00000301305 TOP2BQ02880 1626 aa33.51■■■□□ 2.95
SLC39A4-202ENST00000301305 ACIN1Q9UKV3 1341 aaKnown RBP33.47■■■□□ 2.95
SLC39A4-202ENST00000301305 BIVM-ERCC5R4GMW8 1640 aa33.45■■■□□ 2.94
SLC39A4-202ENST00000301305 TTBK1Q5TCY1 1321 aaPredicted RBP33.44■■■□□ 2.94
SLC39A4-202ENST00000301305 CENPBP07199 599 aaPredicted RBP33.38■■■□□ 2.93
SLC39A4-202ENST00000301305 RAPGEF2Q9Y4G8 1499 aa33.36■■■□□ 2.93
SLC39A4-202ENST00000301305 ERICH3Q5RHP9 1530 aa33.35■■■□□ 2.93
SLC39A4-202ENST00000301305 ZNF316A6NFI3 1004 aaPredicted RBP33.33■■■□□ 2.93
SLC39A4-202ENST00000301305 HMGXB3Q12766 1538 aa33.29■■■□□ 2.92
SLC39A4-202ENST00000301305 APLP2Q06481 763 aa33.28■■■□□ 2.92
SLC39A4-202ENST00000301305 NEUROD1Q13562 356 aa33.22■■■□□ 2.91
SLC39A4-202ENST00000301305 PRXQ9BXM0 1461 aa33.19■■■□□ 2.9
SLC39A4-202ENST00000301305 NCAPD3P42695 1498 aa33.19■■■□□ 2.9
SLC39A4-202ENST00000301305 HNRNPUL2Q1KMD3 747 aaKnown RBP33.07■■■□□ 2.89
SLC39A4-202ENST00000301305 CLSPNQ9HAW4 1339 aa33.07■■■□□ 2.88
SLC39A4-202ENST00000301305 ARAP1Q96P48 1450 aa32.99■■■□□ 2.87
SLC39A4-202ENST00000301305 CUX1P39880 1505 aa32.98■■■□□ 2.87
SLC39A4-202ENST00000301305 KIF27Q86VH2 1401 aa32.98■■■□□ 2.87
SLC39A4-202ENST00000301305 CFTRP13569 1480 aa32.94■■■□□ 2.86
SLC39A4-202ENST00000301305 GTF3C3Q9Y5Q9 886 aa32.93■■■□□ 2.86
SLC39A4-202ENST00000301305 PRDM2Q13029 1718 aa32.91■■■□□ 2.86
SLC39A4-202ENST00000301305 RRBP1Q9P2E9 1410 aaKnown RBP32.82■■■□□ 2.85
SLC39A4-202ENST00000301305 CUX2O14529 1486 aa32.76■■■□□ 2.83
SLC39A4-202ENST00000301305 DHX57Q6P158 1386 aaKnown RBP32.74■■■□□ 2.83
SLC39A4-202ENST00000301305 RANGAP1P46060 587 aaPredicted RBP32.7■■■□□ 2.83
SLC39A4-202ENST00000301305 MIER1Q8N108 512 aa32.68■■■□□ 2.82
SLC39A4-202ENST00000301305 ARHGAP35Q9NRY4 1499 aa32.67■■■□□ 2.82
SLC39A4-202ENST00000301305 MAP3K1Q13233 1512 aa32.66■■■□□ 2.82
SLC39A4-202ENST00000301305 KANK4Q5T7N3 995 aaPredicted RBP32.62■■■□□ 2.81
SLC39A4-202ENST00000301305 CCNB3Q8WWL7 1395 aa32.57■■■□□ 2.8
SLC39A4-202ENST00000301305 IGF1RP08069 1367 aa32.49■■■□□ 2.79
SLC39A4-202ENST00000301305 CADPSQ9ULU8 1353 aa32.47■■■□□ 2.79
SLC39A4-202ENST00000301305 YTHDC1Q96MU7 727 aaKnown RBP32.46■■■□□ 2.79
SLC39A4-202ENST00000301305 TIAM1Q13009 1591 aa32.46■■■□□ 2.79
SLC39A4-202ENST00000301305 CARMIL1Q5VZK9 1371 aa32.38■■■□□ 2.77
SLC39A4-202ENST00000301305 FGD5Q6ZNL6 1462 aa32.35■■■□□ 2.77
SLC39A4-202ENST00000301305 FHAD1B1AJZ9 1412 aa32.34■■■□□ 2.77
SLC39A4-202ENST00000301305 CFAP43Q8NDM7 1665 aa32.3■■■□□ 2.76
SLC39A4-202ENST00000301305 LRRC9Q6ZRR7 1453 aa32.29■■■□□ 2.76
SLC39A4-202ENST00000301305 MYT1Q01538 1121 aa32.24■■■□□ 2.75
SLC39A4-202ENST00000301305 RAB3GAP2Q9H2M9 1393 aa32.22■■■□□ 2.75
SLC39A4-202ENST00000301305 SETD5Q9C0A6 1442 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms