Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HCN1O60741 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HCN1O60741 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
HCN1O60741 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HCN1O60741 NTF6A-201ENST00000591175 560 ntBASIC22.59■■□□□ 1.21
HCN1O60741 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.59■■□□□ 1.21
HCN1O60741 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HCN1O60741 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HCN1O60741 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.58■■□□□ 1.21
HCN1O60741 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
HCN1O60741 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
HCN1O60741 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HCN1O60741 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HCN1O60741 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HCN1O60741 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HCN1O60741 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
HCN1O60741 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.58■■□□□ 1.2
HCN1O60741 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.57■■□□□ 1.2
HCN1O60741 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HCN1O60741 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HCN1O60741 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
HCN1O60741 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.57■■□□□ 1.2
HCN1O60741 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
HCN1O60741 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HCN1O60741 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HCN1O60741 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
HCN1O60741 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
HCN1O60741 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.56■■□□□ 1.2
HCN1O60741 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HCN1O60741 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
HCN1O60741 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HCN1O60741 AL449106.1-201ENST00000608517 1980 ntBASIC22.56■■□□□ 1.2
HCN1O60741 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.56■■□□□ 1.2
HCN1O60741 AL359258.2-201ENST00000564063 1566 ntBASIC22.55■■□□□ 1.2
HCN1O60741 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HCN1O60741 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.55■■□□□ 1.2
HCN1O60741 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HCN1O60741 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HCN1O60741 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HCN1O60741 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HCN1O60741 AL157400.5-201ENST00000507624 621 ntBASIC22.54■■□□□ 1.2
HCN1O60741 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.54■■□□□ 1.2
HCN1O60741 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.54■■□□□ 1.2
HCN1O60741 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HCN1O60741 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.54■■□□□ 1.2
HCN1O60741 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HCN1O60741 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HCN1O60741 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.53■■□□□ 1.2
HCN1O60741 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HCN1O60741 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.53■■□□□ 1.2
HCN1O60741 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.53■■□□□ 1.2
HCN1O60741 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.53■■□□□ 1.2
HCN1O60741 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HCN1O60741 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.53■■□□□ 1.2
HCN1O60741 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.52■■□□□ 1.2
HCN1O60741 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.52■■□□□ 1.2
HCN1O60741 AC091060.1-201ENST00000623524 1766 ntBASIC22.52■■□□□ 1.2
HCN1O60741 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.52■■□□□ 1.2
HCN1O60741 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HCN1O60741 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.5■■□□□ 1.19
HCN1O60741 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HCN1O60741 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.5■■□□□ 1.19
HCN1O60741 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.5■■□□□ 1.19
HCN1O60741 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.5■■□□□ 1.19
HCN1O60741 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HCN1O60741 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HCN1O60741 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCN1O60741 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HCN1O60741 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCN1O60741 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HCN1O60741 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCN1O60741 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.48■■□□□ 1.19
HCN1O60741 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCN1O60741 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCN1O60741 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCN1O60741 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.48■■□□□ 1.19
HCN1O60741 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.48■■□□□ 1.19
HCN1O60741 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.48■■□□□ 1.19
HCN1O60741 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
HCN1O60741 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
HCN1O60741 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.48■■□□□ 1.19
HCN1O60741 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCN1O60741 U85056.1-201ENST00000616429 682 ntBASIC22.47■■□□□ 1.19
HCN1O60741 AC012354.3-201ENST00000623734 483 ntBASIC22.47■■□□□ 1.19
HCN1O60741 AP004609.3-201ENST00000610705 1884 ntBASIC22.47■■□□□ 1.19
HCN1O60741 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCN1O60741 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HCN1O60741 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCN1O60741 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
HCN1O60741 AC007029.1-201ENST00000604183 313 ntBASIC22.45■■□□□ 1.18
HCN1O60741 SMPD5-203ENST00000639008 1464 ntBASIC22.45■■□□□ 1.18
HCN1O60741 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.45■■□□□ 1.18
HCN1O60741 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCN1O60741 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HCN1O60741 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HCN1O60741 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HCN1O60741 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.44■■□□□ 1.18
HCN1O60741 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
HCN1O60741 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HCN1O60741 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms