Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LYRM4Q9HD34 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LYRM4Q9HD34 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LYRM4Q9HD34 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LYRM4Q9HD34 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LYRM4Q9HD34 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LYRM4Q9HD34 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LYRM4Q9HD34 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LYRM4Q9HD34 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LYRM4Q9HD34 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LYRM4Q9HD34 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.19■■□□□ 1.3
LYRM4Q9HD34 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LYRM4Q9HD34 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.19■■□□□ 1.3
LYRM4Q9HD34 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.19■■□□□ 1.3
LYRM4Q9HD34 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 AC025884.2-201ENST00000553429 711 ntBASIC23.18■■□□□ 1.3
LYRM4Q9HD34 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.18■■□□□ 1.3
LYRM4Q9HD34 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LYRM4Q9HD34 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LYRM4Q9HD34 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LYRM4Q9HD34 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.17■■□□□ 1.3
LYRM4Q9HD34 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LYRM4Q9HD34 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LYRM4Q9HD34 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LYRM4Q9HD34 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LYRM4Q9HD34 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.16■■□□□ 1.3
LYRM4Q9HD34 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.16■■□□□ 1.3
LYRM4Q9HD34 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
LYRM4Q9HD34 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.16■■□□□ 1.3
LYRM4Q9HD34 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LYRM4Q9HD34 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LYRM4Q9HD34 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LYRM4Q9HD34 RNF126P1-201ENST00000567452 1320 ntBASIC23.15■■□□□ 1.3
LYRM4Q9HD34 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.15■■□□□ 1.3
LYRM4Q9HD34 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LYRM4Q9HD34 SMPD5-203ENST00000639008 1464 ntBASIC23.15■■□□□ 1.3
LYRM4Q9HD34 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.14■■□□□ 1.29
LYRM4Q9HD34 HSD17B1P1-201ENST00000590052 955 ntBASIC23.14■■□□□ 1.29
LYRM4Q9HD34 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LYRM4Q9HD34 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LYRM4Q9HD34 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LYRM4Q9HD34 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.13■■□□□ 1.29
LYRM4Q9HD34 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LYRM4Q9HD34 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
LYRM4Q9HD34 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
LYRM4Q9HD34 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LYRM4Q9HD34 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LYRM4Q9HD34 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.11■■□□□ 1.29
LYRM4Q9HD34 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
LYRM4Q9HD34 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
LYRM4Q9HD34 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LYRM4Q9HD34 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LYRM4Q9HD34 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
LYRM4Q9HD34 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LYRM4Q9HD34 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.1■■□□□ 1.29
LYRM4Q9HD34 MIR3960-201ENST00000583311 91 ntBASIC23.1■■□□□ 1.29
LYRM4Q9HD34 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
LYRM4Q9HD34 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
LYRM4Q9HD34 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LYRM4Q9HD34 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.09■■□□□ 1.29
LYRM4Q9HD34 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.09■■□□□ 1.29
LYRM4Q9HD34 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.09■■□□□ 1.29
LYRM4Q9HD34 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.09■■□□□ 1.29
LYRM4Q9HD34 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
LYRM4Q9HD34 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LYRM4Q9HD34 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LYRM4Q9HD34 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LYRM4Q9HD34 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.08■■□□□ 1.29
LYRM4Q9HD34 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.08■■□□□ 1.29
LYRM4Q9HD34 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LYRM4Q9HD34 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.08■■□□□ 1.29
LYRM4Q9HD34 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.07■■□□□ 1.28
LYRM4Q9HD34 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LYRM4Q9HD34 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.07■■□□□ 1.28
LYRM4Q9HD34 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LYRM4Q9HD34 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
LYRM4Q9HD34 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.06■■□□□ 1.28
LYRM4Q9HD34 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LYRM4Q9HD34 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LYRM4Q9HD34 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LYRM4Q9HD34 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
LYRM4Q9HD34 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.06■■□□□ 1.28
LYRM4Q9HD34 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms