Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEBOXQ9HB31 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEBOXQ9HB31 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEBOXQ9HB31 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.7■□□□□ 0.9
SEBOXQ9HB31 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.7■□□□□ 0.9
SEBOXQ9HB31 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEBOXQ9HB31 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEBOXQ9HB31 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SEBOXQ9HB31 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEBOXQ9HB31 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEBOXQ9HB31 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SEBOXQ9HB31 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEBOXQ9HB31 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.69■□□□□ 0.9
SEBOXQ9HB31 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEBOXQ9HB31 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEBOXQ9HB31 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SEBOXQ9HB31 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEBOXQ9HB31 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEBOXQ9HB31 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SEBOXQ9HB31 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEBOXQ9HB31 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SEBOXQ9HB31 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEBOXQ9HB31 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.68■□□□□ 0.9
SEBOXQ9HB31 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEBOXQ9HB31 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
SEBOXQ9HB31 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEBOXQ9HB31 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEBOXQ9HB31 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEBOXQ9HB31 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SEBOXQ9HB31 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEBOXQ9HB31 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SEBOXQ9HB31 AP004609.3-201ENST00000610705 1884 ntBASIC20.66■□□□□ 0.9
SEBOXQ9HB31 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEBOXQ9HB31 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEBOXQ9HB31 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEBOXQ9HB31 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.65■□□□□ 0.9
SEBOXQ9HB31 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SEBOXQ9HB31 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEBOXQ9HB31 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEBOXQ9HB31 MIR639-201ENST00000384974 98 ntBASIC20.64■□□□□ 0.89
SEBOXQ9HB31 AC126177.7-201ENST00000547904 679 ntBASIC20.64■□□□□ 0.89
SEBOXQ9HB31 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEBOXQ9HB31 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.64■□□□□ 0.89
SEBOXQ9HB31 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEBOXQ9HB31 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.63■□□□□ 0.89
SEBOXQ9HB31 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEBOXQ9HB31 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEBOXQ9HB31 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEBOXQ9HB31 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEBOXQ9HB31 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SEBOXQ9HB31 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.62■□□□□ 0.89
SEBOXQ9HB31 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEBOXQ9HB31 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEBOXQ9HB31 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.62■□□□□ 0.89
SEBOXQ9HB31 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.62■□□□□ 0.89
SEBOXQ9HB31 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.61■□□□□ 0.89
SEBOXQ9HB31 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEBOXQ9HB31 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEBOXQ9HB31 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.61■□□□□ 0.89
SEBOXQ9HB31 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEBOXQ9HB31 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEBOXQ9HB31 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEBOXQ9HB31 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEBOXQ9HB31 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEBOXQ9HB31 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
SEBOXQ9HB31 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
SEBOXQ9HB31 AL359258.2-201ENST00000564063 1566 ntBASIC20.59■□□□□ 0.89
SEBOXQ9HB31 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.59■□□□□ 0.89
SEBOXQ9HB31 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.59■□□□□ 0.89
SEBOXQ9HB31 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.59■□□□□ 0.89
SEBOXQ9HB31 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEBOXQ9HB31 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEBOXQ9HB31 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEBOXQ9HB31 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SEBOXQ9HB31 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.58■□□□□ 0.89
SEBOXQ9HB31 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SEBOXQ9HB31 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.58■□□□□ 0.89
SEBOXQ9HB31 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SEBOXQ9HB31 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEBOXQ9HB31 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEBOXQ9HB31 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEBOXQ9HB31 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
SEBOXQ9HB31 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEBOXQ9HB31 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SEBOXQ9HB31 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SEBOXQ9HB31 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEBOXQ9HB31 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SEBOXQ9HB31 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SEBOXQ9HB31 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEBOXQ9HB31 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEBOXQ9HB31 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms