Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPB3Q92617 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NPIPB3Q92617 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPB3Q92617 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPB3Q92617 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPB3Q92617 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPB3Q92617 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.22■□□□□ 0.67
NPIPB3Q92617 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPB3Q92617 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPB3Q92617 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.21■□□□□ 0.67
NPIPB3Q92617 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPB3Q92617 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.21■□□□□ 0.67
NPIPB3Q92617 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NPIPB3Q92617 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPB3Q92617 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NPIPB3Q92617 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NPIPB3Q92617 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
NPIPB3Q92617 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NPIPB3Q92617 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB3Q92617 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.2■□□□□ 0.66
NPIPB3Q92617 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NPIPB3Q92617 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB3Q92617 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPIPB3Q92617 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPIPB3Q92617 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.19■□□□□ 0.66
NPIPB3Q92617 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB3Q92617 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB3Q92617 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB3Q92617 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB3Q92617 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB3Q92617 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.18■□□□□ 0.66
NPIPB3Q92617 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NPIPB3Q92617 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB3Q92617 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.17■□□□□ 0.66
NPIPB3Q92617 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB3Q92617 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB3Q92617 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.17■□□□□ 0.66
NPIPB3Q92617 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.17■□□□□ 0.66
NPIPB3Q92617 LINC01971-201ENST00000617888 1048 ntBASIC19.17■□□□□ 0.66
NPIPB3Q92617 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.17■□□□□ 0.66
NPIPB3Q92617 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB3Q92617 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB3Q92617 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB3Q92617 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NPIPB3Q92617 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB3Q92617 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB3Q92617 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB3Q92617 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NPIPB3Q92617 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB3Q92617 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB3Q92617 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.15■□□□□ 0.66
NPIPB3Q92617 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.15■□□□□ 0.66
NPIPB3Q92617 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB3Q92617 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB3Q92617 ERN1-208ENST00000606895 2068 ntBASIC19.15■□□□□ 0.66
NPIPB3Q92617 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB3Q92617 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
NPIPB3Q92617 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPB3Q92617 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.14■□□□□ 0.65
NPIPB3Q92617 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.14■□□□□ 0.65
NPIPB3Q92617 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPB3Q92617 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPB3Q92617 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPB3Q92617 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NPIPB3Q92617 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NPIPB3Q92617 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 AC010501.1-201ENST00000606270 1962 ntBASIC19.13■□□□□ 0.65
NPIPB3Q92617 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPB3Q92617 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPB3Q92617 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.12■□□□□ 0.65
NPIPB3Q92617 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPB3Q92617 RPS2P35-201ENST00000443417 897 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L13-201ENST00000554103 1267 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L15-201ENST00000611059 1267 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L23-201ENST00000615195 1269 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L24-201ENST00000617576 1269 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L22-201ENST00000618238 1269 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L20-201ENST00000619712 1269 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L21-201ENST00000622058 1269 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L10-201ENST00000622460 1267 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DUX4L25-201ENST00000624915 1269 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
NPIPB3Q92617 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPB3Q92617 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.12■□□□□ 0.65
NPIPB3Q92617 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms