Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CCDC146Q8IYE0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CCDC146Q8IYE0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.68■■■□□ 2.82
CCDC146Q8IYE0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CCDC146Q8IYE0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC32.68■■■□□ 2.82
CCDC146Q8IYE0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CCDC146Q8IYE0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CCDC146Q8IYE0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.67■■■□□ 2.82
CCDC146Q8IYE0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCDC146Q8IYE0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCDC146Q8IYE0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.66■■■□□ 2.82
CCDC146Q8IYE0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.66■■■□□ 2.82
CCDC146Q8IYE0 AC142472.1-201ENST00000612013 1741 ntBASIC32.65■■■□□ 2.82
CCDC146Q8IYE0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC146Q8IYE0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC146Q8IYE0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC146Q8IYE0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC146Q8IYE0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.64■■■□□ 2.82
CCDC146Q8IYE0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.64■■■□□ 2.82
CCDC146Q8IYE0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC146Q8IYE0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.63■■■□□ 2.81
CCDC146Q8IYE0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.63■■■□□ 2.81
CCDC146Q8IYE0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC146Q8IYE0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC146Q8IYE0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC146Q8IYE0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
CCDC146Q8IYE0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC146Q8IYE0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.62■■■□□ 2.81
CCDC146Q8IYE0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC146Q8IYE0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC146Q8IYE0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC146Q8IYE0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC146Q8IYE0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC146Q8IYE0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
CCDC146Q8IYE0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
CCDC146Q8IYE0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC32.61■■■□□ 2.81
CCDC146Q8IYE0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC32.61■■■□□ 2.81
CCDC146Q8IYE0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC146Q8IYE0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC146Q8IYE0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC146Q8IYE0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.59■■■□□ 2.81
CCDC146Q8IYE0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC146Q8IYE0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC146Q8IYE0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC32.58■■■□□ 2.81
CCDC146Q8IYE0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC32.58■■■□□ 2.81
CCDC146Q8IYE0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
CCDC146Q8IYE0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.57■■■□□ 2.8
CCDC146Q8IYE0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.57■■■□□ 2.8
CCDC146Q8IYE0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.57■■■□□ 2.8
CCDC146Q8IYE0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
CCDC146Q8IYE0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
CCDC146Q8IYE0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC146Q8IYE0 RNF126P1-201ENST00000567452 1320 ntBASIC32.56■■■□□ 2.8
CCDC146Q8IYE0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC32.56■■■□□ 2.8
CCDC146Q8IYE0 ECEL1P2-201ENST00000461596 1295 ntBASIC32.56■■■□□ 2.8
CCDC146Q8IYE0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC146Q8IYE0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
CCDC146Q8IYE0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CCDC146Q8IYE0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CCDC146Q8IYE0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC146Q8IYE0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC146Q8IYE0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC146Q8IYE0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.53■■■□□ 2.8
CCDC146Q8IYE0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC146Q8IYE0 AC025884.2-201ENST00000553429 711 ntBASIC32.53■■■□□ 2.8
CCDC146Q8IYE0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC146Q8IYE0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
CCDC146Q8IYE0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.53■■■□□ 2.8
CCDC146Q8IYE0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
CCDC146Q8IYE0 RARRES2P2-201ENST00000394842 485 ntBASIC32.52■■■□□ 2.8
CCDC146Q8IYE0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.52■■■□□ 2.8
CCDC146Q8IYE0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.52■■■□□ 2.8
CCDC146Q8IYE0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC32.52■■■□□ 2.8
CCDC146Q8IYE0 SMPD5-203ENST00000639008 1464 ntBASIC32.51■■■□□ 2.79
CCDC146Q8IYE0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.51■■■□□ 2.79
CCDC146Q8IYE0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CCDC146Q8IYE0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC146Q8IYE0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC146Q8IYE0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC146Q8IYE0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC146Q8IYE0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.49■■■□□ 2.79
CCDC146Q8IYE0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.49■■■□□ 2.79
CCDC146Q8IYE0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CCDC146Q8IYE0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
CCDC146Q8IYE0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CCDC146Q8IYE0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC32.48■■■□□ 2.79
CCDC146Q8IYE0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CCDC146Q8IYE0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC32.47■■■□□ 2.79
CCDC146Q8IYE0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.47■■■□□ 2.79
CCDC146Q8IYE0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.47■■■□□ 2.79
CCDC146Q8IYE0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.47■■■□□ 2.79
CCDC146Q8IYE0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC146Q8IYE0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CCDC146Q8IYE0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CCDC146Q8IYE0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32.44■■■□□ 2.78
CCDC146Q8IYE0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC146Q8IYE0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC146Q8IYE0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC32.43■■■□□ 2.78
CCDC146Q8IYE0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CCDC146Q8IYE0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms