Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF546Q86UE3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF546Q86UE3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ZNF546Q86UE3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF546Q86UE3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF546Q86UE3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNF546Q86UE3 AP004609.3-201ENST00000610705 1884 ntBASIC20.29■□□□□ 0.84
ZNF546Q86UE3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF546Q86UE3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF546Q86UE3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ZNF546Q86UE3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ZNF546Q86UE3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF546Q86UE3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF546Q86UE3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
ZNF546Q86UE3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF546Q86UE3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
ZNF546Q86UE3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF546Q86UE3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF546Q86UE3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF546Q86UE3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF546Q86UE3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF546Q86UE3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF546Q86UE3 LINC00543-201ENST00000567234 1845 ntBASIC20.26■□□□□ 0.83
ZNF546Q86UE3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNF546Q86UE3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF546Q86UE3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF546Q86UE3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF546Q86UE3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF546Q86UE3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF546Q86UE3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZNF546Q86UE3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF546Q86UE3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF546Q86UE3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF546Q86UE3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF546Q86UE3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF546Q86UE3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF546Q86UE3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF546Q86UE3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF546Q86UE3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF546Q86UE3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF546Q86UE3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF546Q86UE3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF546Q86UE3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF546Q86UE3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF546Q86UE3 AC079834.2-201ENST00000609776 1949 ntBASIC20.23■□□□□ 0.83
ZNF546Q86UE3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF546Q86UE3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.23■□□□□ 0.83
ZNF546Q86UE3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF546Q86UE3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF546Q86UE3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 AC068473.5-201ENST00000616428 2072 ntBASIC20.22■□□□□ 0.83
ZNF546Q86UE3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF546Q86UE3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF546Q86UE3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF546Q86UE3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF546Q86UE3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF546Q86UE3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF546Q86UE3 AC138932.3-201ENST00000567634 1902 ntBASIC20.2■□□□□ 0.82
ZNF546Q86UE3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF546Q86UE3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZNF546Q86UE3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF546Q86UE3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF546Q86UE3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF546Q86UE3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF546Q86UE3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
ZNF546Q86UE3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF546Q86UE3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF546Q86UE3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF546Q86UE3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ZNF546Q86UE3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF546Q86UE3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF546Q86UE3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF546Q86UE3 AC022211.4-201ENST00000625094 2161 ntBASIC20.18■□□□□ 0.82
ZNF546Q86UE3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF546Q86UE3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF546Q86UE3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF546Q86UE3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF546Q86UE3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF546Q86UE3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF546Q86UE3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF546Q86UE3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF546Q86UE3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF546Q86UE3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ZNF546Q86UE3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF546Q86UE3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ZNF546Q86UE3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF546Q86UE3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF546Q86UE3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF546Q86UE3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZNF546Q86UE3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms